NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
484629 2jn6 15086 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2jn6


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        107
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.350
    _Stereo_assign_list.Total_e_high_states  2.484
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  2 PRO QG 106 no 100.0   0.0 0.000 0.001 0.001  2  0 no 0.118 0 0 
       1  4 LYS QB  84 no   0.0   0.0 0.000 0.001 0.001  4  0 no 0.107 0 0 
       1  4 LYS QD  33 no 100.0   0.0 0.000 0.016 0.016  8  0 no 0.367 0 0 
       1  4 LYS QG  83 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.012 0 0 
       1  6 TYR QB   6 no 100.0   0.0 0.000 0.011 0.011 16  8 no 0.219 0 0 
       1  7 SER QB  56 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.041 0 0 
       1  8 GLU QG  82 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1  9 GLU QB  81 no   5.0   0.0 0.000 0.016 0.016  4  0 no 0.251 0 0 
       1  9 GLU QG 105 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 10 PHE QB  26 no 100.0   0.0 0.000 0.001 0.001 10  4 no 0.102 0 0 
       1 11 LYS QB   4 no 100.0  99.9 0.625 0.626 0.001 17  4 no 0.085 0 0 
       1 11 LYS QD  11 no 100.0   0.0 0.000 0.002 0.002 12  0 no 0.101 0 0 
       1 11 LYS QE   7 no  95.0   0.0 0.000 0.004 0.004 14  4 no 0.132 0 0 
       1 11 LYS QG  43 no 100.0   0.0 0.000 0.000 0.000  8  4 no 0.000 0 0 
       1 12 ARG QB  55 no 100.0   0.0 0.000 0.003 0.003  6  0 no 0.143 0 0 
       1 12 ARG QD  54 no 100.0   0.0 0.000 0.005 0.005  6  0 no 0.273 0 0 
       1 12 ARG QG  53 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 13 ASP QB  15 no 100.0   0.0 0.000 0.000 0.000 12  4 no 0.017 0 0 
       1 15 VAL QG   2 no 100.0   0.0 0.000 0.000 0.000 34 20 no 0.000 0 0 
       1 17 LEU QB  52 no 100.0   0.0 0.000 0.001 0.001  6  0 no 0.069 0 0 
       1 17 LEU QD  14 no 100.0   0.0 0.000 0.002 0.002 12  4 no 0.094 0 0 
       1 18 TYR QB  10 no 100.0   0.0 0.000 0.001 0.001 12  0 no 0.058 0 0 
       1 19 GLU QB  42 no 100.0   0.0 0.000 0.000 0.000  8  4 no 0.043 0 0 
       1 19 GLU QG  25 no 100.0   0.0 0.000 0.000 0.000 10  4 no 0.000 0 0 
       1 20 ASN QB  51 no 100.0   0.0 0.000 0.003 0.003  6  0 no 0.092 0 0 
       1 20 ASN QD  13 no 100.0   0.0 0.000 0.000 0.000 12  4 no 0.000 0 0 
       1 21 SER QB  32 no 100.0  96.3 0.507 0.527 0.019  8  0 no 0.173 0 0 
       1 22 ASP QB  80 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.007 0 0 
       1 25 SER QB  41 no 100.0   0.0 0.000 0.001 0.001  8  4 no 0.111 0 0 
       1 26 LEU QB  50 no 100.0   0.0 0.000 0.003 0.003  6  0 no 0.219 0 0 
       1 26 LEU QD   3 no 100.0   0.0 0.000 0.000 0.000 23  4 no 0.000 0 0 
       1 27 GLN QB  40 no 100.0   0.0 0.000 0.000 0.000  8  4 no 0.041 0 0 
       1 27 GLN QE  39 no 100.0   0.0 0.000 0.000 0.000  8  4 no 0.000 0 0 
       1 27 GLN QG  38 no 100.0   0.0 0.000 0.006 0.006  8  4 no 0.137 0 0 
       1 28 GLN QB   8 no  85.0  98.3 0.056 0.057 0.001 14  6 no 0.111 0 0 
       1 28 GLN QE 107 no 100.0   0.0 0.000 0.000 0.000  2  2 no 0.000 0 0 
       1 28 GLN QG  79 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 29 ILE QG  31 no 100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 31 ASN QB  49 no  35.0  92.7 0.056 0.060 0.004  6  0 no 0.182 0 0 
       1 31 ASN QD  37 no 100.0   0.0 0.000 0.006 0.006  8  4 no 0.137 0 0 
       1 32 ASP QB  24 no 100.0   0.0 0.000 0.002 0.002 10  4 no 0.094 0 0 
       1 33 LEU QB  12 no 100.0   0.0 0.000 0.001 0.001 12  4 no 0.081 0 0 
       1 33 LEU QD   5 no 100.0   0.0 0.000 0.000 0.000 16  4 no 0.000 0 0 
       1 35 ILE QG  23 no 100.0   0.0 0.000 0.000 0.000 10  4 no 0.000 0 0 
       1 36 ASN QB   9 no 100.0   0.0 0.000 0.007 0.007 12  0 no 0.166 0 0 
       1 36 ASN QD  36 no 100.0   0.0 0.000 0.030 0.030  8  4 no 0.226 0 0 
       1 37 ARG QB  22 no   0.0   0.0 0.000 0.019 0.019 10  4 no 0.169 0 0 
       1 37 ARG QG  78 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 38 VAL QG 104 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 40 LEU QB  18 no 100.0   0.0 0.000 0.000 0.000 10  0 no 0.000 0 0 
       1 40 LEU QD   1 no 100.0 100.0 0.238 0.238 0.000 35  2 no 0.025 0 0 
       1 41 LYS QB  21 no 100.0   0.0 0.000 0.008 0.008 10  4 no 0.154 0 0 
       1 41 LYS QD  30 no 100.0   0.0 0.000 0.002 0.002  8  0 no 0.089 0 0 
       1 41 LYS QG  77 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 42 ASN QB  29 no  90.0  98.4 0.459 0.466 0.007  8  0 no 0.301 0 0 
       1 42 ASN QD 103 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 43 TRP QB  27 no 100.0   0.0 0.000 0.000 0.000 10  6 no 0.000 0 0 
       1 44 ILE QG  20 no 100.0   0.0 0.000 0.000 0.000 10  4 no 0.000 0 0 
       1 45 ILE QG  48 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.027 0 0 
       1 46 LYS QB  17 no 100.0   0.0 0.000 0.003 0.003 10  0 no 0.153 0 0 
       1 46 LYS QD  16 no 100.0   0.0 0.000 0.001 0.001 10  0 no 0.058 0 0 
       1 46 LYS QE 102 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 46 LYS QG  76 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 47 TYR QB  35 no 100.0   0.0 0.000 0.001 0.001  8  4 no 0.052 0 0 
       1 48 GLY QA  19 no 100.0   0.0 0.000 0.000 0.000 10  4 no 0.013 0 0 
       1 49 SER QB  75 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.033 0 0 
       1 50 ASN QB  74 no  90.0  93.5 0.193 0.206 0.014  4  0 no 0.225 0 0 
       1 51 HIS QB  73 no 100.0   0.0 0.000 0.003 0.003  4  0 no 0.155 0 0 
       1 52 ASN QB  72 no 100.0   0.0 0.000 0.013 0.013  4  0 no 0.303 0 0 
       1 53 VAL QG 101 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 54 GLN QB  71 no 100.0   0.0 0.000 0.003 0.003  4  0 no 0.169 0 0 
       1 54 GLN QE 100 no 100.0   0.0 0.000 0.003 0.003  2  0 no 0.152 0 0 
       1 54 GLN QG  99 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 55 GLY QA  98 no 100.0   0.0 0.000 0.004 0.004  2  0 no 0.118 0 0 
       1 58 PRO QD  97 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 62 VAL QG  96 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 63 SER QB  70 no 100.0   0.0 0.000 0.003 0.003  4  0 no 0.163 0 0 
       1 64 GLU QB  95 no 100.0   0.0 0.000 0.001 0.001  2  0 no 0.101 0 0 
       1 64 GLU QG  28 no 100.0   0.0 0.000 0.000 0.000  8  0 no 0.014 0 0 
       1 66 GLU QB  34 no   0.0   0.0 0.000 0.009 0.009  8  4 no 0.288 0 0 
       1 66 GLU QG  94 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 67 GLN QE  57 no 100.0   0.0 0.000 0.004 0.004  6  4 no 0.200 0 0 
       1 67 GLN QG  69 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 68 ILE QG  68 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 69 ARG QG  47 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.020 0 0 
       1 70 GLN QB  46 no 100.0   0.0 0.000 0.026 0.026  6  0 no 0.487 0 0 
       1 70 GLN QG  45 no   0.0   0.0 0.000 0.012 0.012  6  0 no 0.161 0 0 
       1 71 LEU QB  67 no 100.0   0.0 0.000 0.004 0.004  4  0 no 0.164 0 0 
       1 71 LEU QD  93 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 74 GLU QB  92 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 75 ASN QB  66 no 100.0   0.0 0.000 0.009 0.009  4  0 no 0.250 0 0 
       1 77 LEU QB  91 no 100.0   0.0 0.000 0.013 0.013  2  0 no 0.135 0 0 
       1 77 LEU QD  65 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 79 ARG QB  90 no   0.0   0.0 0.000 0.002 0.002  2  0 no 0.099 0 0 
       1 81 ARG QB  64 no   0.0   0.0 0.000 0.010 0.010  4  0 no 0.175 0 0 
       1 81 ARG QG  63 no 100.0   0.0 0.000 0.009 0.009  4  0 no 0.380 0 0 
       1 83 ARG QB  62 no 100.0   0.0 0.000 0.014 0.014  4  0 no 0.177 0 0 
       1 83 ARG QG  61 no   0.0   0.0 0.000 0.004 0.004  4  0 no 0.178 0 0 
       1 84 HIS QB  89 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 85 PRO QB  88 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 85 PRO QD  44 no 100.0   0.0 0.000 0.005 0.005  6  0 no 0.183 0 0 
       1 85 PRO QG  87 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 87 GLU QB  60 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 88 SER QB  59 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 89 CYS QB  58 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 90 LEU QB  86 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 90 LEU QD  85 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 3, 2024 2:49:08 AM GMT (wattos1)