NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
409908 1zv6 6718 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1zv6


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        51
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          21
    _Stereo_assign_list.Total_e_low_states   0.800
    _Stereo_assign_list.Total_e_high_states  121.990
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  3 LEU QB 36 no 100.0 100.0  0.023  0.023 0.000  9  3 no 0.197 0 0 
       1  3 LEU QD 11 no  81.0   1.0  0.000  0.002 0.002 16  3 no 0.067 0 0 
       1  4 GLN QB 40 no 100.0  99.9  3.339  3.343 0.003  8  1 no 0.107 0 0 
       1  5 ILE QG 48 no 100.0   0.0  0.000  0.004 0.004  2  0 no 0.093 0 0 
       1  6 TYR QB 26 no  71.4  98.3  0.121  0.123 0.002 12  3 no 0.112 0 0 
       1  8 TYR QB 25 no 100.0   0.0  0.000  0.001 0.001 12  3 no 0.063 0 0 
       1  9 GLU QB 50 no 100.0   0.0  0.000  0.000 0.000  1  0 no 0.000 0 0 
       1 11 LEU QB 30 no  95.2  15.8  0.002  0.012 0.010 10  4 no 0.147 0 0 
       1 11 LEU QD  1 no 100.0  99.7  5.568  5.584 0.016 40 17 no 0.206 0 0 
       1 12 VAL QG  6 no 100.0  99.4  7.728  7.776 0.048 25  1 no 0.275 0 0 
       1 13 VAL QG 15 no 100.0  99.6 11.816 11.860 0.044 15  1 no 0.248 0 0 
       1 15 ASN QB 22 no 100.0  99.9  0.210  0.210 0.000 12  1 no 0.047 0 0 
       1 15 ASN QD 47 no  90.5  93.2  0.067  0.071 0.005  3  1 no 0.116 0 0 
       1 16 LYS QB 39 no 100.0  99.9  0.001  0.001 0.000  8  0 no 0.093 0 0 
       1 18 ARG QB 33 no  47.6  69.3  0.014  0.020 0.006  9  0 no 0.136 0 0 
       1 20 LYS QB 38 no 100.0  97.5  2.343  2.404 0.061  8  0 no 0.318 0 0 
       1 21 LEU QB 13 no  95.2  90.2  0.008  0.009 0.001 16  8 no 0.167 0 0 
       1 21 LEU QD  9 no 100.0  94.2  1.306  1.386 0.080 19  8 no 0.330 0 0 
       1 25 VAL QG  2 no 100.0  93.6  1.137  1.214 0.077 37 11 no 0.330 0 0 
       1 26 ASP QB 45 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 27 ARG QD 49 no 100.0   0.0  0.000  0.001 0.001  2  2 no 0.055 0 0 
       1 29 ARG QB 44 no  90.5  78.9  0.001  0.002 0.000  5  0 no 0.064 0 0 
       1 30 LEU QD 12 no 100.0  99.8  6.937  6.953 0.016 16  4 no 0.187 0 0 
       1 31 GLU QB 29 no 100.0  99.9  1.951  1.952 0.001 10  0 no 0.060 0 0 
       1 33 HIS QB 18 no 100.0  99.0  0.037  0.037 0.000 13  4 no 0.236 0 0 
       1 34 LEU QB 16 no 100.0 100.0  0.000  0.000 0.000 15  5 no 0.011 0 0 
       1 34 LEU QD  3 no 100.0  99.5 23.327 23.456 0.129 33 12 no 0.358 0 0 
       1 37 GLU QB 32 no 100.0  99.8  2.068  2.073 0.004  9  0 no 0.072 0 0 
       1 38 ASP QB 24 no 100.0   0.0  0.000  0.000 0.000 12  3 no 0.002 0 0 
       1 42 VAL QG  5 no 100.0  99.8 14.581 14.603 0.023 28  6 no 0.161 0 0 
       1 43 PHE QB 14 no 100.0  99.8  0.726  0.728 0.002 15  0 no 0.075 0 0 
       1 45 MET QB 31 no  95.2  56.1  0.002  0.004 0.002  9  0 no 0.297 0 0 
       1 48 GLU QB 42 no 100.0  98.8  0.138  0.140 0.002  7  0 no 0.082 0 0 
       1 49 GLU QB 21 no 100.0  87.2  0.561  0.643 0.083 12  0 no 0.319 0 0 
       1 50 PHE QB 27 no 100.0   0.0  0.000  0.000 0.000 11  0 no 0.000 0 0 
       1 52 LYS QB 41 no 100.0   0.0  0.000  0.000 0.000  7  0 no 0.000 0 0 
       1 53 LEU QB 28 no 100.0  90.8  0.042  0.046 0.004 11  3 no 0.232 0 0 
       1 53 LEU QD  4 no 100.0  99.9 10.730 10.738 0.008 30  5 no 0.082 0 0 
       1 55 LEU QB 35 no 100.0  40.4  0.007  0.018 0.011  9  1 no 0.117 0 0 
       1 55 LEU QD 34 no 100.0  99.9  3.121  3.123 0.003  9  1 no 0.071 0 0 
       1 58 ARG QB 20 no  76.2  99.7  0.085  0.085 0.000 12  0 no 0.060 0 0 
       1 58 ARG QD 51 no  95.2  99.8  0.542  0.544 0.001  1  1 no 0.069 0 0 
       1 59 ASN QB 19 no 100.0   0.0  0.000  0.000 0.000 12  0 no 0.023 0 0 
       1 61 LEU QB 10 no 100.0  99.8  0.021  0.021 0.000 18  4 no 0.157 0 0 
       1 61 LEU QD  8 no 100.0  99.5  5.448  5.474 0.025 24  6 no 0.142 0 0 
       1 62 LYS QB 43 no 100.0 100.0  2.021  2.021 0.001  6  1 no 0.053 0 0 
       1 63 LYS QB 37 no 100.0  98.9  2.866  2.898 0.032  8  0 no 0.223 0 0 
       1 64 LYS QB 46 no 100.0   0.0  0.000  0.000 0.000  3  0 no 0.000 0 0 
       1 67 LEU QB 23 no 100.0  98.7  4.249  4.307 0.057 12  3 no 0.243 0 0 
       1 67 LEU QD  7 no 100.0  99.6  8.045  8.077 0.033 25 10 no 0.227 0 0 
       1 68 PHE QB 17 no 100.0   0.0  0.000  0.002 0.002 13  0 no 0.075 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 2, 2024 1:13:34 AM GMT (wattos1)