NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage position program type subtype subsubtype
4417 1f79 cing 1-original 1 XPLOR/CNS distance hydrogen bond simple


 {base pairing between 1 and 27 GC pair}
assign (residue 27 and name h41)(residue 1 and name o6) 1.7 .1 .1
assign (residue 27 and name n3)(residue 1 and name h21) 3.0 .1 .1
assign (residue 27 and name o2)(residue 1 and name h21) 2.0 .1 .1
assign (residue 27 and name n3)(residue 1 and name h1) 1.9 .1 .1

 {base pairing between 2 and 26 GC pair}
assign (residue 26 and name h41)(residue 2 and name o6) 1.7 .1 .1
assign (residue 26 and name n3)(residue 2 and name h21) 3.0 .1 .1
assign (residue 26 and name o2)(residue 2 and name h21) 2.0 .1 .1
assign (residue 26 and name n3)(residue 2 and name h1) 1.9 .1 .1

 {base pairing between 3 and 25 AU pair}
assign (residue 3 and name h2)(residue 25 and name o2) 3.2 .1 .1
assign (residue 3 and name n1)(residue 25 and name h3) 1.9 .1 .1
assign (residue 3 and name h61)(residue 25 and name o4) 1.8 .1 .1
assign (residue 3 and name h2)(residue 25 and name h3) 2.9 .1 .1

 {base pairing between 4 and 24 AU pair}
assign (residue 4 and name h2)(residue 24 and name o2) 3.2 .1 .1
assign (residue 4 and name n1)(residue 24 and name h3) 1.9 .1 .1
assign (residue 4 and name h61)(residue 24 and name o4) 1.8 .1 .1
assign (residue 4 and name h2)(residue 24 and name h3) 2.9 .1 .1

 {base pairing between 5 and 24 GC pair}
assign (residue 23 and name h41)(residue 5 and name o6) 1.7 .1 .1
assign (residue 23 and name n3)(residue 5 and name h21) 3.0 .1 .1
assign (residue 23 and name o2)(residue 5 and name h21) 2.0 .1 .1
assign (residue 23 and name n3)(residue 5 and name h1) 1.9 .1 .1

 {base pairing between 6 and 22 UG pair - standard wobble}
assign (residue 22 and name h1)(residue 6 and name o2) 1.8 .1 .1
assign (residue 22 and name h1)(residue 6 and name h3) 2.6 .1 .1
assign (residue 22 and name o6)(residue 6 and name h3) 1.9 .1 .1
assign (residue 22 and name o6)(residue 6 and name o2) 3.7 .1 .1
assign (residue 22 and name n1)(residue 6 and name n3) 3.7 .1 .1

 {base 7: unpaired}

 {base pairing between 8 and 21 CG pair}
assign (residue 8 and name h41)(residue 21 and name o6) 1.7 .1 .1
assign (residue 8 and name n3)(residue 21 and name h21) 3.0 .1 .1
assign (residue 8 and name o2)(residue 21 and name h21) 2.0 .1 .1
assign (residue 8 and name n3)(residue 21 and name h1) 1.9 .1 .1

 {base pairing between 9 and 20 GC pair}
assign (residue 20 and name h41)(residue 9 and name o6) 1.7 .1 .1
assign (residue 20 and name n3)(residue 9 and name h21) 3.0 .1 .1
assign (residue 20 and name o2)(residue 9 and name h21) 2.0 .1 .1
assign (residue 20 and name n3)(residue 9 and name h1) 1.9 .1 .1

 {base pairing between 10 and 19 GC pair}
assign (residue 19 and name h41)(residue 10 and name o6) 1.7 .1 .1
assign (residue 19 and name n3)(residue 10 and name h21) 3.0 .1 .1
assign (residue 19 and name o2)(residue 10 and name h21) 2.0 .1 .1
assign (residue 19 and name n3)(residue 10 and name h1) 1.9 .1 .1

 {base pairing between 11 and 18 AU pair}
assign (residue 18 and name h2)(residue 11 and name o2) 3.2 .1 .1
assign (residue 18 and name n1)(residue 11 and name h3) 1.9 .1 .1
assign (residue 18 and name h61)(residue 11 and name o4) 1.8 .1 .1
assign (residue 18 and name h2)(residue 11 and name h3) 2.9 .1 .1

 {base pairing between 12 and 17 CG pair}
assign (residue 12 and name h41)(residue 17 and name o6) 1.7 .1 .1
assign (residue 12 and name n3)(residue 17 and name h21) 3.0 .1 .1
assign (residue 12 and name o2)(residue 17 and name h21) 2.0 .1 .1
assign (residue 12 and name n3)(residue 17 and name h1) 1.9 .1 .1

 {base 13-16: UUCG tetraloop, fill in from literature ...}
assign (residue 13 and name o2)(residue 16 and name h1) 1.9 .2 .2
assign (residue 13 and name o2)(residue 16 and name h21) 2.4 .2 .2
assign (residue 13 and name h3)(residue 16 and name h21) 3.8 .2 .2
assign (residue 13 and name h3)(residue 16 and name h1) 4.4 .2 .2



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