NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | bmrb_id | cing | stage | position | program | type |
649424 | 6pk9 | 30622 | cing | 1-original | 2 | XPLOR/CNS | planarity |
!Planarity restraints ! G1-C20 WC !-------------------------------------------------------------------- group select= ((resid 1 and (name N1 or name C6 or name C2)) or (resid 20 and (name N3))) weight=80 end group select= ((resid 1 and (name N1)) or (resid 20 and (name N3 or name C2 or name C4))) weight=80 end ! G2-C19 WC !-------------------------------------------------------------------- group select= ((resid 2 and (name N1 or name C6 or name C2)) or (resid 19 and (name N3))) weight=80 end group select= ((resid 2 and (name N1)) or (resid 19 and (name N3 or name C2 or name C4))) weight=80 end ! A3-U18 WC !-------------------------------------------------------------------- group select= ((resid 3 and (name N1 or name C2 or name C6)) or (resid 18 and (name N3))) weight=80 end group select= ((resid 3 and (name N1)) or (resid 18 and (name N3 or name C2 or name C4))) weight=80 end ! G4-C17 WC !-------------------------------------------------------------------- group select= ((resid 4 and (name N1 or name C6 or name C2)) or (resid 17 and (name N3))) weight=80 end group select= ((resid 4 and (name N1)) or (resid 17 and (name N3 or name C2 or name C4))) weight=80 end ! G5-U16 Wobb !-------------------------------------------------------------------- group select= ((resid 5 and (name N1 or name C6 or name C2)) or (resid 16 and (name N3))) weight=80 end group select= ((resid 5 and (name N1)) or (resid 16 and (name N3 or name C2 or name C4))) weight=80 end ! G6-C15 WC !-------------------------------------------------------------------- group select= ((resid 6 and (name N1 or name C6 or name C2)) or (resid 15 and (name N3))) weight=80 end group select= ((resid 6 and (name N1)) or (resid 15 and (name N3 or name C2 or name C4))) weight=80 end ! U7-G14 Wobb !-------------------------------------------------------------------- group select= ((resid 14 and (name N1 or name C6 or name C2)) or (resid 7 and (name N3))) weight=80 end group select= ((resid 14 and (name N1)) or (resid 7 and (name N3 or name C2 or name C4))) weight=80 end # Restraints file 3: D_1000241105_mr_P1.xplor-nih.V1 ! ! Torsion angle restraints for sugar pucker in the ! - LINKA ! ! ! Pucker is defined with ribose torsion angles nu1 and nu2. ! nu1 = O4'-C1'-C2'-C3' ! nu2 = C1'-C2'-C3'-C4' ! "N" C3' endo: ! nu1 = -20 +/- 10 ! nu2 = +35 +/- 5 ! "S" C2' endo: ! nu1 = +35 +/- 10 ! nu2 = -35 +/- 5 ! See Saenger page 20. ! ! C2' endo nucleotides (Judging from TOCSY): only if both H1'-H2'' and ! H1'-H3' couplings both are strong (intensity of H1'-H3' even larger) ! Xhi is defined as follows... ! Purines = O4'-C1'-N9-C4 ! pyrimidine = O4'-C1'-N1-C2 ! Anti: ! Xhi = 180.0 +/- 90.0 ! including high-anti and excluding high-syn : ! Xhi = =-150 +/- 90.0 ! Syn: Xhi = 0.0 +/- 90.0 ! See Saenger page 22. !3' endo!
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