NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage position program type
583502 2mko cing 1-original 5 AMBER dihedral angle


#RST.sugar
#
# 359 atoms read from pdb file template.pdb.
# 1 GUA NU0:  (1 DG5 C4')-(1 DG5 O4')-(1 DG5 C1')-(1 DG5 C2') -32.3  -2.3
 &rst     iat =     6,     8,     9,    28,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
   rk2 =   200.0, rk3 =   200.0,    &end

# 1 GUA NU1:  (1 DG5 O4')-(1 DG5 C1')-(1 DG5 C2')-(1 DG5 C3')  18.9  48.9
 &rst     iat =     8,     9,    28,    26,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 1 GUA NU2:  (1 DG5 C1')-(1 DG5 C2')-(1 DG5 C3')-(1 DG5 C4') -52.6 -22.6
 &rst     iat =     9,    28,    26,     6,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 1 GUA NU3:  (1 DG5 C2')-(1 DG5 C3')-(1 DG5 C4')-(1 DG5 O4')  11.9  41.9
 &rst     iat =    28,    26,     6,     8,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 1 GUA NU4:  (1 DG5 C3')-(1 DG5 C4')-(1 DG5 O4')-(1 DG5 C1') -20.9   9.1
 &rst     iat =    26,     6,     8,     9,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end

# 2 GUA NU0:  (2 DG C4')-(2 DG O4')-(2 DG C1')-(2 DG C2') -32.3  -2.3
 &rst     iat =    39,    41,    42,    61,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
 &end

# 2 GUA NU1:  (2 DG O4')-(2 DG C1')-(2 DG C2')-(2 DG C3')  18.9  48.9
 &rst     iat =    41,    42,    61,    59,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 2 GUA NU2:  (2 DG C1')-(2 DG C2')-(2 DG C3')-(2 DG C4') -52.6 -22.6
 &rst     iat =    42,    61,    59,    39,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 2 GUA NU3:  (2 DG C2')-(2 DG C3')-(2 DG C4')-(2 DG O4')  11.9  41.9
 &rst     iat =    61,    59,    39,    41,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 2 GUA NU4:  (2 DG C3')-(2 DG C4')-(2 DG O4')-(2 DG C1') -20.9   9.1
 &rst     iat =    59,    39,    41,    42,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end

# 5 GUA NU0:  (5 DG C4')-(5 DG O4')-(5 DG C1')-(5 DG C2') -32.3  -2.3
 &rst     iat =   136,   138,   139,   158,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
 &end

# 5 GUA NU1:  (5 DG O4')-(5 DG C1')-(5 DG C2')-(5 DG C3')  18.9  48.9
 &rst     iat =   138,   139,   158,   156,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 5 GUA NU2:  (5 DG C1')-(5 DG C2')-(5 DG C3')-(5 DG C4') -52.6 -22.6
 &rst     iat =   139,   158,   156,   136,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 5 GUA NU3:  (5 DG C2')-(5 DG C3')-(5 DG C4')-(5 DG O4')  11.9  41.9
 &rst     iat =   158,   156,   136,   138,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 5 GUA NU4:  (5 DG C3')-(5 DG C4')-(5 DG O4')-(5 DG C1') -20.9   9.1
 &rst     iat =   156,   136,   138,   139,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end

# 6 GUA NU0:  (6 DG C4')-(6 DG O4')-(6 DG C1')-(6 DG C2') -32.3  -2.3
 &rst     iat =   169,   171,   172,   191,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
 &end

# 6 GUA NU1:  (6 DG O4')-(6 DG C1')-(6 DG C2')-(6 DG C3')  18.9  48.9
 &rst     iat =   171,   172,   191,   189,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 6 GUA NU2:  (6 DG C1')-(6 DG C2')-(6 DG C3')-(6 DG C4') -52.6 -22.6
 &rst     iat =   172,   191,   189,   169,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 6 GUA NU3:  (6 DG C2')-(6 DG C3')-(6 DG C4')-(6 DG O4')  11.9  41.9
 &rst     iat =   191,   189,   169,   171,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 6 GUA NU4:  (6 DG C3')-(6 DG C4')-(6 DG O4')-(6 DG C1') -20.9   9.1
 &rst     iat =   189,   169,   171,   172,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end

# 10 GUA NU0:  (10 DG C4')-(10 DG O4')-(10 DG C1')-(10 DG C2') -32.3  -2.3
 &rst     iat =   299,   301,   302,   321,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
 &end

# 10 GUA NU1:  (10 DG O4')-(10 DG C1')-(10 DG C2')-(10 DG C3')  18.9  48.9
 &rst     iat =   301,   302,   321,   319,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 10 GUA NU2:  (10 DG C1')-(10 DG C2')-(10 DG C3')-(10 DG C4') -52.6 -22.6
 &rst     iat =   302,   321,   319,   299,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 10 GUA NU3:  (10 DG C2')-(10 DG C3')-(10 DG C4')-(10 DG O4')  11.9  41.9
 &rst     iat =   321,   319,   299,   301,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 10 GUA NU4:  (10 DG C3')-(10 DG C4')-(10 DG O4')-(10 DG C1') -20.9   9.1
 &rst     iat =   319,   299,   301,   302,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end

# 8 GUA NU0:  (8 DG C4')-(8 DG O4')-(8 DG C1')-(8 DG C2') -32.3  -2.3
 &rst     iat =   234,   236,   237,   256,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
 &end

# 8 GUA NU1:  (8 DG O4')-(8 DG C1')-(8 DG C2')-(8 DG C3')  18.9  48.9
 &rst     iat =   236,   237,   256,   254,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 8 GUA NU2:  (8 DG C1')-(8 DG C2')-(8 DG C3')-(8 DG C4') -52.6 -22.6
 &rst     iat =   237,   256,   254,   234,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 8 GUA NU3:  (8 DG C2')-(8 DG C3')-(8 DG C4')-(8 DG O4')  11.9  41.9
 &rst     iat =   256,   254,   234,   236,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 8 GUA NU4:  (8 DG C3')-(8 DG C4')-(8 DG O4')-(8 DG C1') -20.9   9.1
 &rst     iat =   254,   234,   236,   237,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end

# 3 THY NU0:  (3 DT C4')-(3 DT O4')-(3 DT C1')-(3 DT C2') -32.3  -2.3
 &rst     iat =    72,    74,    75,    93,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
 &end

# 3 THY NU1:  (3 DT O4')-(3 DT C1')-(3 DT C2')-(3 DT C3')  18.9  48.9
 &rst     iat =    74,    75,    93,    91,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 3 THY NU2:  (3 DT C1')-(3 DT C2')-(3 DT C3')-(3 DT C4') -52.6 -22.6
 &rst     iat =    75,    93,    91,    72,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 3 THY NU3:  (3 DT C2')-(3 DT C3')-(3 DT C4')-(3 DT O4')  11.9  41.9
 &rst     iat =    93,    91,    72,    74,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 3 THY NU4:  (3 DT C3')-(3 DT C4')-(3 DT O4')-(3 DT C1') -20.9   9.1
 &rst     iat =    91,    72,    74,    75,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end

# 4 THY NU0:  (4 DT C4')-(4 DT O4')-(4 DT C1')-(4 DT C2') -32.3  -2.3
 &rst     iat =   104,   106,   107,   125,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
 &end

# 4 THY NU1:  (4 DT O4')-(4 DT C1')-(4 DT C2')-(4 DT C3')  18.9  48.9
 &rst     iat =   106,   107,   125,   123,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 4 THY NU2:  (4 DT C1')-(4 DT C2')-(4 DT C3')-(4 DT C4') -52.6 -22.6
 &rst     iat =   107,   125,   123,   104,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 4 THY NU3:  (4 DT C2')-(4 DT C3')-(4 DT C4')-(4 DT O4')  11.9  41.9
 &rst     iat =   125,   123,   104,   106,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 4 THY NU4:  (4 DT C3')-(4 DT C4')-(4 DT O4')-(4 DT C1') -20.9   9.1
 &rst     iat =   123,   104,   106,   107,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end

# 7 THY NU0:  (7 DT C4')-(7 DT O4')-(7 DT C1')-(7 DT C2') -32.3  -2.3
 &rst     iat =   202,   204,   205,   223,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
 &end

# 7 THY NU1:  (7 DT O4')-(7 DT C1')-(7 DT C2')-(7 DT C3')  18.9  48.9
 &rst     iat =   204,   205,   223,   221,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 7 THY NU2:  (7 DT C1')-(7 DT C2')-(7 DT C3')-(7 DT C4') -52.6 -22.6
 &rst     iat =   205,   223,   221,   202,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 7 THY NU3:  (7 DT C2')-(7 DT C3')-(7 DT C4')-(7 DT O4')  11.9  41.9
 &rst     iat =   223,   221,   202,   204,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 7 THY NU4:  (7 DT C3')-(7 DT C4')-(7 DT O4')-(7 DT C1') -20.9   9.1
 &rst     iat =   221,   202,   204,   205,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end

# 9 THY NU0:  (9 DT C4')-(9 DT O4')-(9 DT C1')-(9 DT C2') -32.3  -2.3
 &rst     iat =   267,   269,   270,   288,
   r1 = -33.3, r2 = -32.3, r3 =  -2.3, r4 =  -1.3,
 &end

# 9 THY NU1:  (9 DT O4')-(9 DT C1')-(9 DT C2')-(9 DT C3')  18.9  48.9
 &rst     iat =   269,   270,   288,   286,
   r1 =  17.9, r2 =  18.9, r3 =  48.9, r4 =  49.9,
 &end

# 9 THY NU2:  (9 DT C1')-(9 DT C2')-(9 DT C3')-(9 DT C4') -52.6 -22.6
 &rst     iat =   270,   288,   286,   267,
   r1 = -53.6, r2 = -52.6, r3 = -22.6, r4 = -21.6,
 &end

# 9 THY NU3:  (9 DT C2')-(9 DT C3')-(9 DT C4')-(9 DT O4')  11.9  41.9
 &rst     iat =   288,   286,   267,   269,
   r1 =  10.9, r2 =  11.9, r3 =  41.9, r4 =  42.9,
 &end

# 9 THY NU4:  (9 DT C3')-(9 DT C4')-(9 DT O4')-(9 DT C1') -20.9   9.1
 &rst     iat =   286,   267,   269,   270,
   r1 = -21.9, r2 = -20.9, r3 =   9.1, r4 =  10.1,
 &end
#rst.BB
# 359 atoms read from pdb file template.pdb.
# 2 GUA BETA:  (2 DG P)-(2 DG O5')-(2 DG C5')-(2 DG C4') 130.0 230.0
 &rst     iat =    32,    35,    36,    39,
   r1 = 129.0, r2 = 130.0, r3 = 230.0, r4 = 231.0,
   rk2 =   200.0, rk3 =   200.0,    &end

# 5 GUA BETA:  (5 DG P)-(5 DG O5')-(5 DG C5')-(5 DG C4') 130.0 230.0
 &rst     iat =   129,   132,   133,   136,
   r1 = 129.0, r2 = 130.0, r3 = 230.0, r4 = 231.0,
 &end

# 6 GUA BETA:  (6 DG P)-(6 DG O5')-(6 DG C5')-(6 DG C4') 130.0 230.0
 &rst     iat =   162,   165,   166,   169,
   r1 = 129.0, r2 = 130.0, r3 = 230.0, r4 = 231.0,
 &end

# 10 GUA BETA:  (10 DG P)-(10 DG O5')-(10 DG C5')-(10 DG C4') 130.0 230.0
 &rst     iat =   292,   295,   296,   299,
   r1 = 129.0, r2 = 130.0, r3 = 230.0, r4 = 231.0,
 &end

# 11 GUA BETA:  (11 DG3 P)-(11 DG3 O5')-(11 DG3 C5')-(11 DG3 C4') 130.0 230.0
 &rst     iat =   325,   328,   329,   332,
   r1 = 129.0, r2 = 130.0, r3 = 230.0, r4 = 231.0,
 &end

# 8 GUA BETA:  (8 DG P)-(8 DG O5')-(8 DG C5')-(8 DG C4') 130.0 230.0
 &rst     iat =   227,   230,   231,   234,
   r1 = 129.0, r2 = 130.0, r3 = 230.0, r4 = 231.0,
 &end

# 1 GUA GAMMA:  (1 DG5 O5')-(1 DG5 C5')-(1 DG5 C4')-(1 DG5 C3')  20.0 100.0
 &rst     iat =     2,     3,     6,    26,
   r1 =  19.0, r2 =  20.0, r3 = 100.0, r4 = 101.0,
 &end

# 2 GUA GAMMA:  (2 DG O5')-(2 DG C5')-(2 DG C4')-(2 DG C3')  20.0 100.0
 &rst     iat =    35,    36,    39,    59,
   r1 =  19.0, r2 =  20.0, r3 = 100.0, r4 = 101.0,
 &end

# 6 GUA GAMMA:  (6 DG O5')-(6 DG C5')-(6 DG C4')-(6 DG C3')  20.0 100.0
 &rst     iat =   165,   166,   169,   189,
   r1 =  19.0, r2 =  20.0, r3 = 100.0, r4 = 101.0,
 &end


# 11 GUA GAMMA:  (11 DG3 O5')-(11 DG3 C5')-(11 DG3 C4')-(11 DG3 C3')  20.0 100.0
 &rst     iat =   328,   329,   332,   352,
   r1 =  19.0, r2 =  20.0, r3 = 100.0, r4 = 101.0,
 &end

# 8 GUA GAMMA:  (8 DG O5')-(8 DG C5')-(8 DG C4')-(8 DG C3')  20.0 100.0
 &rst     iat =   230,   231,   234,   254,
   r1 =  19.0, r2 =  20.0, r3 = 100.0, r4 = 101.0,
 &end

# 3 THY GAMMA:  (3 DT O5')-(3 DT C5')-(3 DT C4')-(3 DT C3')  20.0 100.0
 &rst     iat =    68,    69,    72,    91,
   r1 =  19.0, r2 =  20.0, r3 = 100.0, r4 = 101.0,
 &end

# 4 THY GAMMA:  (4 DT O5')-(4 DT C5')-(4 DT C4')-(4 DT C3')  20.0 100.0
 &rst     iat =   100,   101,   104,   123,
   r1 =  19.0, r2 =  20.0, r3 = 100.0, r4 = 101.0,
 &end

# 7 THY GAMMA:  (7 DT O5')-(7 DT C5')-(7 DT C4')-(7 DT C3')  20.0 100.0
 &rst     iat =   198,   199,   202,   221,
   r1 =  19.0, r2 =  20.0, r3 = 100.0, r4 = 101.0,
 &end

# 9 THY GAMMA:  (9 DT O5')-(9 DT C5')-(9 DT C4')-(9 DT C3')  20.0 100.0
 &rst     iat =   263,   264,   267,   286,
   r1 =  19.0, r2 =  20.0, r3 = 100.0, r4 = 101.0,
 &end

# 1 GUA CHI:  (1 DG5 O4')-(1 DG5 C1')-(1 DG5 N9)-(1 DG5 C4)  45.0  95.0
 &rst     iat =     8,     9,    11,    25,
   r1 =  44.0, r2 =  45.0, r3 =  95.0, r4 =  96.0,
 &end

# 2 GUA CHI:  (2 DG O4')-(2 DG C1')-(2 DG N9)-(2 DG C4) 200.0 280.0
 &rst     iat =    41,    42,    44,    58,
   r1 = 199.0, r2 = 200.0, r3 = 280.0, r4 = 281.0,
 &end

# 5 GUA CHI:  (5 DG O4')-(5 DG C1')-(5 DG N9)-(5 DG C4)  45.0  95.0
 &rst     iat =   138,   139,   141,   155,
   r1 =  44.0, r2 =  45.0, r3 =  95.0, r4 =  96.0,
 &end

# 6 GUA CHI:  (6 DG O4')-(6 DG C1')-(6 DG N9)-(6 DG C4) 200.0 280.0
 &rst     iat =   171,   172,   174,   188,
   r1 = 199.0, r2 = 200.0, r3 = 280.0, r4 = 281.0,
 &end

# 10 GUA CHI:  (10 DG O4')-(10 DG C1')-(10 DG N9)-(10 DG C4)  45.0  95.0
 &rst     iat =   301,   302,   304,   318,
   r1 =  44.0, r2 =  45.0, r3 =  95.0, r4 =  96.0,
 &end

# 11 GUA CHI:  (11 DG3 O4')-(11 DG3 C1')-(11 DG3 N9)-(11 DG3 C4) 200.0 280.0
 &rst     iat =   334,   335,   337,   351,
   r1 = 199.0, r2 = 200.0, r3 = 280.0, r4 = 281.0,
 &end

# 8 GUA CHI:  (8 DG O4')-(8 DG C1')-(8 DG N9)-(8 DG C4) 200.0 280.0
 &rst     iat =   236,   237,   239,   253,
   r1 = 199.0, r2 = 200.0, r3 = 280.0, r4 = 281.0,
 &end

# 3 THY CHI:  (3 DT O4')-(3 DT C1')-(3 DT N1)-(3 DT C2) 200.0 280.0
 &rst     iat =    74,    75,    77,    89,
   r1 = 199.0, r2 = 200.0, r3 = 280.0, r4 = 281.0,
 &end

# 4 THY CHI:  (4 DT O4')-(4 DT C1')-(4 DT N1)-(4 DT C2) 200.0 280.0
 &rst     iat =   106,   107,   109,   121,
   r1 = 199.0, r2 = 200.0, r3 = 280.0, r4 = 281.0,
 &end

# 7 THY CHI:  (7 DT O4')-(7 DT C1')-(7 DT N1)-(7 DT C2) 200.0 280.0
 &rst     iat =   204,   205,   207,   219,
   r1 = 199.0, r2 = 200.0, r3 = 280.0, r4 = 281.0,
 &end

# 9 THY CHI:  (9 DT O4')-(9 DT C1')-(9 DT N1)-(9 DT C2) 200.0 280.0
 &rst     iat =   269,   270,   272,   284,
   r1 = 199.0, r2 = 200.0, r3 = 280.0, r4 = 281.0,
 &end





Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 17, 2024 11:59:25 PM GMT (wattos1)