NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
651385 6m3n 36320 cing 4-filtered-FRED Wattos check stereo assignment distance


data_6m3n


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        63
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.144
    _Stereo_assign_list.Total_e_high_states  43.734
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  6 PHE QB 16 no   5.0  38.3  0.011  0.030 0.018 15  4 no 0.150 0 0 
       1  8 SER QB 38 no   0.0   0.0  0.000  0.000 0.000  6  4 no 0.051 0 0 
       1  9 ILE QG 31 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 10 VAL QG 51 no 100.0   0.0  0.000  0.003 0.003  4  0 no 0.149 0 0 
       1 14 PRO QB 40 no   5.0  79.2  0.003  0.004 0.001  5  0 no 0.064 0 0 
       1 14 PRO QD 25 no  35.0  84.8  0.092  0.108 0.016 10  0 no 0.216 0 0 
       1 14 PRO QG 63 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 15 ASP QB 50 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 16 PHE QB 49 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 17 GLY QA 62 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 18 GLY QA 61 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 19 PHE QB 48 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 20 GLU QB 17 no 100.0  99.9  4.045  4.049 0.004 15  5 no 0.095 0 0 
       1 20 GLU QG 36 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 21 PHE QB  8 no 100.0  99.8  1.025  1.027 0.002 20  4 no 0.095 0 0 
       1 22 TYR QB 33 no 100.0  99.9  0.218  0.218 0.000  7  0 no 0.044 0 0 
       1 23 VAL QG  1 no 100.0  99.8 16.933 16.974 0.042 35  8 no 0.232 0 0 
       1 24 GLU QB 47 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 26 GLY QA 60 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 27 GLN QB 37 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 27 GLN QE 59 no 100.0   0.0  0.000  0.001 0.001  2  0 no 0.157 0 0 
       1 28 GLN QB 58 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 28 GLN QG 57 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 29 PHE QB  4 no 100.0  99.6  1.376  1.380 0.005 28 11 no 0.110 0 0 
       1 30 ASP QB 23 no  50.0  93.1  0.148  0.159 0.011 11  0 no 0.163 0 0 
       1 31 ASP QB  7 no  90.0  99.8  0.318  0.318 0.001 21  6 no 0.060 0 0 
       1 32 SER QB 46 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 34 TYR QB 30 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 35 GLU QB 56 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 36 GLU QB 29 no 100.0   0.0  0.000  0.001 0.001  8  0 no 0.089 0 0 
       1 36 GLU QG 55 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 38 TYR QB 10 no 100.0  99.9  1.147  1.148 0.001 19  4 no 0.106 0 0 
       1 39 GLY QA 39 no 100.0 100.0  1.043  1.044 0.000  5  0 no 0.059 0 0 
       1 40 VAL QG 18 no 100.0   0.0  0.000  0.004 0.004 14  4 no 0.276 0 0 
       1 42 VAL QG  6 no 100.0   0.0  0.000  0.000 0.000 22  8 no 0.000 0 0 
       1 43 PRO QB 35 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 43 PRO QD  9 no 100.0 100.0  0.954  0.954 0.000 20  8 no 0.000 0 0 
       1 43 PRO QG 45 no 100.0   0.0  0.000  0.001 0.001  4  0 no 0.061 0 0 
       1 46 VAL QG  5 no 100.0   0.0  0.000  0.000 0.000 22  8 no 0.053 0 0 
       1 47 VAL QG 20 no 100.0   0.0  0.000  0.000 0.000 12  2 no 0.058 0 0 
       1 50 MET QB 27 no 100.0   0.0  0.000  0.001 0.001 10  6 no 0.110 0 0 
       1 51 ASN QB 22 no 100.0 100.0  0.402  0.402 0.000 11  0 no 0.000 0 0 
       1 51 ASN QD 15 no  45.0  99.7  0.464  0.465 0.001 15  4 no 0.068 0 0 
       1 53 LYS QB 28 no 100.0 100.0  0.469  0.469 0.000  9  4 no 0.000 0 0 
       1 53 LYS QE 32 no   0.0   0.0  0.000  0.005 0.005  8  6 no 0.197 0 0 
       1 53 LYS QG 54 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 56 GLN QB 53 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 56 GLN QE 52 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.050 0 0 
       1 56 GLN QG 44 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 57 LEU QB 13 no 100.0  98.9  0.154  0.156 0.002 17  5 no 0.078 0 0 
       1 57 LEU QD  3 no 100.0 100.0  3.126  3.126 0.000 28  8 no 0.046 0 0 
       1 58 LYS QB 43 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 58 LYS QG 42 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.007 0 0 
       1 61 GLU QB 19 no 100.0  99.8  1.235  1.238 0.002 14  5 no 0.105 0 0 
       1 61 GLU QG 41 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 62 TRP QB 21 no  80.0  99.6  0.033  0.034 0.000 11  0 no 0.029 0 0 
       1 63 LEU QB 14 no 100.0 100.0  0.259  0.259 0.000 15  4 no 0.005 0 0 
       1 63 LEU QD  2 no 100.0  99.8  9.814  9.830 0.016 34  8 no 0.148 0 0 
       1 64 ASN QB 11 no   5.0  10.6  0.000  0.003 0.003 18  0 no 0.119 0 0 
       1 64 ASN QD 26 no 100.0   0.0  0.000  0.001 0.001 10  4 no 0.064 0 0 
       1 65 VAL QG 12 no 100.0   0.0  0.000  0.000 0.000 18  6 no 0.061 0 0 
       1 66 SER QB 34 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 68 GLU QB 24 no  80.0  99.6  0.321  0.322 0.001 10  0 no 0.155 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 10, 2024 5:48:57 AM GMT (wattos1)