NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
650811 | 6xeh | 30763 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_6xeh save_NOE_Completeness _NOE_completeness_stats.Sf_category NOE_completeness_statistics _NOE_completeness_stats.Model_count 20 _NOE_completeness_stats.Residue_count 125 _NOE_completeness_stats.Total_atom_count 2048 _NOE_completeness_stats.Observable_atom_definition ob_standard _NOE_completeness_stats.Observable_atom_count 707 _NOE_completeness_stats.Use_intra_residue_restraints no _NOE_completeness_stats.Redundancy_threshold_pct 5.0 _NOE_completeness_stats.Distance_averaging_power 1.00 _NOE_completeness_stats.Completeness_cutoff 4.00 _NOE_completeness_stats.Completeness_cumulative_pct 68.8 _NOE_completeness_stats.Constraint_unexpanded_count 4070 _NOE_completeness_stats.Constraint_count 4070 _NOE_completeness_stats.Constraint_exp_unfiltered_count 2340 _NOE_completeness_stats.Constraint_exceptional_count 0 _NOE_completeness_stats.Constraint_nonobservable_count 80 _NOE_completeness_stats.Constraint_intraresidue_count 849 _NOE_completeness_stats.Constraint_surplus_count 315 _NOE_completeness_stats.Constraint_observed_count 2826 _NOE_completeness_stats.Constraint_expected_count 2106 _NOE_completeness_stats.Constraint_matched_count 1449 _NOE_completeness_stats.Constraint_unmatched_count 1377 _NOE_completeness_stats.Constraint_exp_nonobs_count 657 _NOE_completeness_stats.Details ; A detailed methodology description is available at: http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html Please note that the contributions in ambiguous restraints are considered separate 'restraints' for the sets defined below. The cut off for all statistics except those in the by-shell table is given below by the above tag: _NOE_completeness_stats.Completeness_cutoff Description of the tags in this list: * 1 * Administrative tag * 2 * Administrative tag * 3 * Administrative tag * 4 * Number of models * 5 * Number of residues * 6 * Number of atoms * 7 * Standard set name of observable atom definitions see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999). * 8 * Observable atom(group)s * 9 * Include intra residue restraints * 10 * Surplus threshold for determining redundant restraints * 11 * Power for averaging the distance over models * 12 * Up to what distance are NOEs expected * 13 * Cumulative completeness percentage * 14 * Number of unexpanded restraints in restraint list. * 15 * Number of restraints in restraint list. Set U * 16 * Expected restraints based on criteria in list. Set V Set V differs from set B only if intra residue restraints are analyzed. * 17 * Exceptional restraints, i.e. with an unknown atom.Set E * 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O Even though restraints with these atom types might have been observed they are excluded from the analysis. * 19 * Intra-residue restraints if not to be analyzed. Set I * 20 * Surplus like double restraints. Set S * 21 * Observed restraints. Set A = U - (E u O u I u S) * 22 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 23 * Observed restraints matched to the expected. Set M = A n B * 24 * Observed restraints that were not expected. Set C = A - M * 25 * Expected restraints that were not observed. Set D = B - M * 26 * This tag Description of the tags in the class table: * 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts. Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular. * 2 * Observed restraints. Set A = U - (E u O u I u S) * 3 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 4 * Observed restraints matched to the expected. Set M = A n B * 5 * Completeness percentage * 6 * Standard deviation from the average over the classes. * 7 * Extra information * 8 * Administrative tag * 9 * Administrative tag Description of the tags in the shell table. The first row shows the lower limit of the shells requested and The last row shows the total number of restraints over the shells. * 1 * Description of the content of the row: edges, shell, or sums. The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others. * 2 * Lower limit of shell of expected restraints. * 3 * Upper limit of shell of expected restraints. * 4 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 5 * Observed restraints matched to the expected. Set M = A n B * 6 * Matched restraints with experimental distance in shell 1 * 7 * Matched restraints with experimental distance in shell 2 * 8 * Matched restraints with experimental distance in shell 3 * 9 * Matched restraints with experimental distance in shell 4 * 10 * Matched restraints with experimental distance in shell 5 * 11 * Matched restraints with experimental distance in shell 6 * 12 * Matched restraints with experimental distance in shell 7 * 13 * Matched restraints with experimental distance in shell 8 * 14 * Matched restraints with experimental distance in shell 9 * 15 * Matched restraints overflowing the last shell * 16 * Completeness percentage for this shell * 17 * Completeness percentage up to upper limit of this shell * 18 * Administrative tag * 19 * Administrative tag Description of the tags in the residue table: * 1 * Chain identifier * 2 * Residue number * 3 * Residue name * 4 * Observable atom(group)s for this residue. * 5 * Observed restraints. Set A = U - (E u O u I u S) * 6 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 7 * Observed restraints matched to the expected. Set M = A n B * 8 * Completeness percentage * 9 * Standard deviation from the average over the residues. * 10 * Extra information * 11 * Administrative tag * 12 * Administrative tag ; loop_ _NOE_completeness_class.Type _NOE_completeness_class.Constraint_observed_count _NOE_completeness_class.Constraint_expected_count _NOE_completeness_class.Constraint_matched_count _NOE_completeness_class.Completeness_cumulative_pct _NOE_completeness_class.Std_dev _NOE_completeness_class.Details intraresidue 0 0 0 . . "no intras" sequential 791 567 385 67.9 -0.4 . medium-range 857 468 354 75.6 1.0 >sigma long-range 1178 1071 710 66.3 -0.6 . intermolecular 0 0 0 . . "no multimer" stop_ loop_ _NOE_completeness_shell.Type _NOE_completeness_shell.Shell_start _NOE_completeness_shell.Shell_end _NOE_completeness_shell.Constraint_expected_count _NOE_completeness_shell.Constraint_matched_count _NOE_completeness_shell.Matched_shell_1 _NOE_completeness_shell.Matched_shell_2 _NOE_completeness_shell.Matched_shell_3 _NOE_completeness_shell.Matched_shell_4 _NOE_completeness_shell.Matched_shell_5 _NOE_completeness_shell.Matched_shell_6 _NOE_completeness_shell.Matched_shell_7 _NOE_completeness_shell.Matched_shell_8 _NOE_completeness_shell.Matched_shell_9 _NOE_completeness_shell.Matched_shell_overflow _NOE_completeness_shell.Completeness_shell_pct _NOE_completeness_shell.Completeness_cumulative_pct edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . . shell 0.00 2.00 42 36 0 0 6 16 10 3 0 1 . 0 85.7 85.7 shell 2.00 2.50 240 202 0 2 33 60 52 38 11 5 . 1 84.2 84.4 shell 2.50 3.00 438 374 0 1 21 109 102 80 37 16 . 8 85.4 85.0 shell 3.00 3.50 506 361 0 0 1 15 89 128 66 41 . 21 71.3 79.4 shell 3.50 4.00 880 476 0 0 0 7 54 154 143 77 . 41 54.1 68.8 shell 4.00 4.50 1422 637 0 0 0 0 9 91 280 173 . 84 44.8 59.1 shell 4.50 5.00 1858 412 0 0 0 0 0 12 87 179 . 134 22.2 46.4 shell 5.00 5.50 2333 223 0 0 0 0 0 0 6 63 . 154 9.6 35.3 shell 5.50 6.00 2536 81 0 0 0 0 0 0 0 1 . 80 3.2 27.3 shell 6.00 6.50 2854 21 0 0 0 0 0 0 0 1 . 20 0.7 21.5 shell 6.50 7.00 3350 3 0 0 0 0 0 0 0 0 . 3 0.1 17.2 shell 7.00 7.50 3509 0 0 0 0 0 0 0 0 0 . 0 0.0 14.2 shell 7.50 8.00 3919 0 0 0 0 0 0 0 0 0 . 0 0.0 11.8 shell 8.00 8.50 4136 0 0 0 0 0 0 0 0 0 . 0 0.0 10.1 shell 8.50 9.00 4405 0 0 0 0 0 0 0 0 0 . 0 0.0 8.7 sums . . 32428 2826 0 3 61 207 316 506 630 557 . 546 . . stop_ loop_ _NOE_completeness_comp.Entity_assembly_ID _NOE_completeness_comp.Comp_index_ID _NOE_completeness_comp.Comp_ID _NOE_completeness_comp.Obs_atom_count _NOE_completeness_comp.Constraint_observed_count _NOE_completeness_comp.Constraint_expected_count _NOE_completeness_comp.Constraint_matched_count _NOE_completeness_comp.Completeness_cumulative_pct _NOE_completeness_comp.Std_dev _NOE_completeness_comp.Details 1 1 MET 6 0 4 0 0.0 -3.3 >sigma 1 2 GLY 3 0 9 0 0.0 -3.3 >sigma 1 3 LYS 7 33 31 15 48.4 -0.8 . 1 4 VAL 5 69 37 31 83.8 0.9 . 1 5 VAL 5 86 55 43 78.2 0.6 . 1 6 PHE 7 95 72 58 80.6 0.8 . 1 7 LEU 7 74 58 39 67.2 0.1 . 1 8 SER 4 44 33 26 78.8 0.7 . 1 9 ASP 4 18 15 7 46.7 -0.9 . 1 10 ASP 4 39 17 16 94.1 1.4 >sigma 1 11 GLN 7 38 24 20 83.3 0.9 . 1 12 GLU 5 23 20 10 50.0 -0.8 . 1 13 ILE 6 95 66 47 71.2 0.3 . 1 14 ILE 6 96 60 52 86.7 1.1 >sigma 1 15 GLU 5 36 23 18 78.3 0.7 . 1 16 GLU 5 41 37 23 62.2 -0.2 . 1 17 VAL 5 85 57 46 80.7 0.8 . 1 18 SER 4 34 21 15 71.4 0.3 . 1 19 LYS 7 19 20 11 55.0 -0.5 . 1 20 LYS 7 35 48 21 43.8 -1.1 >sigma 1 21 ALA 3 50 33 26 78.8 0.7 . 1 22 GLU 5 19 17 10 58.8 -0.3 . 1 23 GLU 5 23 19 14 73.7 0.4 . 1 24 GLU 5 32 25 18 72.0 0.3 . 1 25 GLY 3 14 9 5 55.6 -0.5 . 1 26 TYR 6 59 40 34 85.0 1.0 . 1 27 ASP 4 13 4 3 75.0 0.5 . 1 28 ILE 6 78 50 38 76.0 0.5 . 1 29 GLN 7 37 24 14 58.3 -0.3 . 1 30 THR 4 53 34 31 91.2 1.3 >sigma 1 31 SER 4 32 23 22 95.7 1.5 >sigma 1 32 ASN 6 23 19 14 73.7 0.4 . 1 33 ASP 4 21 11 8 72.7 0.4 . 1 34 LYS 7 45 36 21 58.3 -0.3 . 1 35 LYS 7 22 16 10 62.5 -0.1 . 1 36 GLU 5 31 23 16 69.6 0.2 . 1 37 ILE 6 73 71 41 57.7 -0.4 . 1 38 ILE 6 93 57 42 73.7 0.4 . 1 39 ASP 4 45 20 17 85.0 1.0 . 1 40 ARG 7 59 47 31 66.0 0.0 . 1 41 LEU 7 74 71 40 56.3 -0.4 . 1 42 LYS 7 44 35 27 77.1 0.6 . 1 43 ARG 7 31 25 17 68.0 0.1 . 1 44 ARG 7 27 18 14 77.8 0.6 . 1 45 ASN 6 37 22 18 81.8 0.8 . 1 46 ILE 6 78 70 41 58.6 -0.3 . 1 47 ASP 4 24 19 12 63.2 -0.1 . 1 48 MET 6 90 54 38 70.4 0.3 . 1 49 ILE 6 76 68 35 51.5 -0.7 . 1 50 ILE 6 81 73 47 64.4 -0.0 . 1 51 VAL 5 66 54 36 66.7 0.1 . 1 52 LYS 7 70 68 41 60.3 -0.2 . 1 53 THR 4 40 32 21 65.6 0.0 . 1 54 GLU 5 26 22 16 72.7 0.4 . 1 55 ASP 4 26 14 9 64.3 -0.0 . 1 56 LYS 7 47 33 25 75.8 0.5 . 1 57 GLU 5 25 14 11 78.6 0.7 . 1 58 SER 4 43 25 18 72.0 0.3 . 1 59 ILE 6 88 55 41 74.5 0.5 . 1 60 SER 4 44 23 18 78.3 0.7 . 1 61 GLU 5 40 27 20 74.1 0.4 . 1 62 ILE 6 64 68 34 50.0 -0.8 . 1 63 ILE 6 112 67 51 76.1 0.5 . 1 64 LYS 7 45 25 19 76.0 0.5 . 1 65 GLN 7 69 49 37 75.5 0.5 . 1 66 VAL 5 69 55 37 67.3 0.1 . 1 67 LEU 7 54 30 25 83.3 0.9 . 1 68 ASP 4 22 10 9 90.0 1.2 >sigma 1 69 SER 4 37 23 19 82.6 0.9 . 1 70 GLY 3 16 11 7 63.6 -0.1 . 1 71 ALA 3 36 22 17 77.3 0.6 . 1 72 LYS 7 46 41 23 56.1 -0.5 . 1 73 VAL 5 71 54 34 63.0 -0.1 . 1 74 LEU 7 97 75 63 84.0 0.9 . 1 75 ILE 6 95 65 46 70.8 0.3 . 1 76 LEU 7 96 65 49 75.4 0.5 . 1 77 SER 4 41 35 26 74.3 0.5 . 1 78 SER 4 34 22 16 72.7 0.4 . 1 79 ASP 4 30 18 15 83.3 0.9 . 1 80 GLU 5 29 19 15 78.9 0.7 . 1 81 ASN 6 30 15 11 73.3 0.4 . 1 82 ILE 6 82 56 41 73.2 0.4 . 1 83 ILE 6 91 62 49 79.0 0.7 . 1 84 GLU 5 40 25 18 72.0 0.3 . 1 85 SER 4 44 25 17 68.0 0.1 . 1 86 ILE 6 94 70 51 72.9 0.4 . 1 87 ARG 7 43 34 20 58.8 -0.3 . 1 88 LYS 7 30 19 13 68.4 0.2 . 1 89 GLN 7 33 26 16 61.5 -0.2 . 1 90 TYR 6 68 49 40 81.6 0.8 . 1 91 PRO 5 19 14 10 71.4 0.3 . 1 92 LYS 7 19 16 10 62.5 -0.1 . 1 93 VAL 5 56 45 25 55.6 -0.5 . 1 94 GLU 5 36 29 23 79.3 0.7 . 1 95 THR 4 61 36 33 91.7 1.3 >sigma 1 96 ARG 7 46 43 27 62.8 -0.1 . 1 97 ARG 7 44 33 26 78.8 0.7 . 1 98 ALA 3 53 32 27 84.4 1.0 . 1 99 GLN 7 34 30 21 70.0 0.2 . 1 100 ASP 4 27 18 12 66.7 0.1 . 1 101 LYS 7 40 34 19 55.9 -0.5 . 1 102 GLU 5 37 25 14 56.0 -0.5 . 1 103 GLU 5 40 33 22 66.7 0.1 . 1 104 VAL 5 75 58 44 75.9 0.5 . 1 105 LYS 7 57 56 29 51.8 -0.7 . 1 106 ASP 4 30 19 11 57.9 -0.4 . 1 107 ALA 3 50 35 24 68.6 0.2 . 1 108 VAL 5 65 59 37 62.7 -0.1 . 1 109 GLU 5 39 37 24 64.9 -0.0 . 1 110 GLU 5 32 23 17 73.9 0.4 . 1 111 PHE 7 109 76 60 78.9 0.7 . 1 112 LEU 7 74 47 35 74.5 0.5 . 1 113 LYS 7 31 22 14 63.6 -0.1 . 1 114 GLU 5 16 15 6 40.0 -1.3 >sigma 1 115 GLY 3 13 11 5 45.5 -1.0 . 1 116 GLY 3 13 17 8 47.1 -0.9 . 1 117 SER 4 7 10 6 60.0 -0.3 . 1 118 LEU 7 41 47 27 57.4 -0.4 . 1 119 GLU 5 8 8 4 50.0 -0.8 . 1 120 HIS 6 3 8 2 25.0 -2.0 >sigma 1 121 HIS 6 0 8 0 0.0 -3.3 >sigma 1 122 HIS 6 0 7 0 0.0 -3.3 >sigma 1 123 HIS 6 0 7 0 0.0 -3.3 >sigma 1 124 HIS 6 0 8 0 0.0 -3.3 >sigma 1 125 HIS 6 0 4 0 0.0 -3.3 >sigma stop_ save_
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