NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type subtype subsubtype
646797 6kjn cing 4-filtered-FRED Wattos check stereo assignment distance


data_6kjn


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        90
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       1
    _Stereo_assign_list.Deassign_percentage  1.1
    _Stereo_assign_list.Model_count          10
    _Stereo_assign_list.Total_e_low_states   2.562
    _Stereo_assign_list.Total_e_high_states  84.063
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   7 ILE QG 54 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000 0  0 
       1   8 GLN QB 88 no 100.0   0.0  0.000  0.002 0.002  2 0 no  0.127 0  0 
       1  10 CYS QB 87 no 100.0   0.0  0.000  0.004 0.004  2 0 no  0.174 0  0 
       1  14 ILE QG 53 no 100.0   0.0  0.000  0.002 0.002  4 0 no  0.128 0  0 
       1  15 LEU QB 55 no 100.0   0.0  0.000  0.001 0.001  4 2 no  0.115 0  0 
       1  15 LEU QD 90 no   0.0   0.0  0.000  0.035 0.035  2 2 no  0.493 0  0 
       1  16 GLU QB 52 no 100.0 100.0  1.173  1.173 0.000  4 0 no  0.000 0  0 
       1  18 GLN QB 22 no 100.0  98.3  2.744  2.792 0.048  7 2 no  0.344 0  0 
       1  18 GLN QG  3 no 100.0  92.7  2.658  2.867 0.209 23 6 no  0.604 0  3 
       1  20 GLY QA 61 no 100.0   0.0  0.000  0.004 0.004  4 4 no  0.193 0  0 
       1  21 VAL QG 10 no 100.0   0.0  0.000  0.025 0.025 12 4 no  0.249 0  0 
       1  22 LYS QB 34 no 100.0  98.3  2.625  2.669 0.045  6 1 no  0.417 0  0 
       1  22 LYS QG 11 no 100.0  99.6  7.051  7.077 0.026 12 5 no  0.294 0  0 
       1  23 ASN QB 86 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  28 GLN QB 31 no 100.0   0.0  0.000  0.000 0.000  6 0 no  0.000 0  0 
       1  28 GLN QG 30 no 100.0   0.0  0.000  0.058 0.058  6 0 no  0.442 0  0 
       1  29 LEU QB 51 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000 0  0 
       1  29 LEU QD 35 no 100.0   0.0  0.000  0.000 0.000  6 2 no  0.023 0  0 
       1  32 ILE QG 85 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  35 MET QG 29 no 100.0   0.0  0.000  0.001 0.001  6 0 no  0.107 0  0 
       1  36 VAL QG 84 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  37 ASN QB 89 no 100.0   0.0  0.000  0.001 0.001  2 2 no  0.080 0  0 
       1  38 PRO QB  4 no 100.0  99.7  4.044  4.058 0.014 17 4 no  0.209 0  0 
       1  38 PRO QD 18 no 100.0  99.4  0.729  0.733 0.004  8 2 no  0.147 0  0 
       1  38 PRO QG 50 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000 0  0 
       1  39 PRO QD 37 no 100.0   0.0  0.000  0.000 0.000  6 4 no  0.000 0  0 
       1  39 PRO QG 49 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000 0  0 
       1  41 GLY QA  8 no 100.0  97.9  7.186  7.343 0.157 12 1 no  0.539 0  2 
       1  42 VAL QG 83 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  44 ILE QG 33 no 100.0  99.1  2.435  2.458 0.023  6 1 no  0.433 0  0 
       1  45 VAL QG 14 no 100.0   0.0  0.000  0.445 0.445 10 8 no  0.299 0  0 
       1  46 MET QB 20 no 100.0  99.9  1.022  1.023 0.001  7 0 no  0.080 0  0 
       1  46 MET QG 13 no 100.0   0.0  0.000  0.507 0.507 10 4 yes 0.874 0 11 
       1  47 GLU QB 82 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  47 GLU QG 81 no 100.0   0.0  0.000  0.008 0.008  2 0 no  0.284 0  0 
       1  49 VAL QG  6 no 100.0   0.0  0.000  0.026 0.026 14 2 no  0.305 0  0 
       1  50 CYS QB 80 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  52 ILE QG 48 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000 0  0 
       1  53 LEU QD 28 no 100.0   0.0  0.000  0.067 0.067  6 0 no  0.449 0  0 
       1  55 TYR QB 79 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  56 GLN QG 78 no 100.0   0.0  0.000  0.007 0.007  2 0 no  0.256 0  0 
       1  61 ARG QB 27 no 100.0  99.4  2.729  2.745 0.016  6 0 no  0.205 0  0 
       1  62 ASP QB 77 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  63 ILE QG 62 no 100.0  99.5  2.994  3.009 0.015  3 0 no  0.203 0  0 
       1  65 GLN QG 76 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  67 ILE QG 75 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  68 ARG QG 74 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  72 PHE QB 12 no 100.0  99.6  3.297  3.312 0.015 10 2 no  0.233 0  0 
       1  73 ILE QG 17 no 100.0  99.9  0.404  0.405 0.000  8 0 no  0.064 0  0 
       1  74 HIS QB 73 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  76 ILE QG 72 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  77 VAL QG  2 no 100.0  99.5  6.463  6.493 0.030 27 9 no  0.228 0  0 
       1  78 HIS QB 32 no 100.0  99.8  1.836  1.839 0.003  6 1 no  0.126 0  0 
       1  79 TYR QB 47 no 100.0   0.0  0.000  0.036 0.036  4 0 no  0.464 0  0 
       1  80 ASP QB 71 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.018 0  0 
       1  83 LEU QD 70 no 100.0   0.0  0.000  0.001 0.001  2 0 no  0.120 0  0 
       1  89 ILE QG 46 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000 0  0 
       1  93 MET QB 69 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1  93 MET QG 26 no 100.0   0.0  0.000  0.009 0.009  6 0 no  0.228 0  0 
       1  95 GLU QG 45 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.046 0  0 
       1  96 GLU QG 25 no 100.0   0.0  0.000  0.036 0.036  6 0 no  0.373 0  0 
       1  97 PHE QB 44 no 100.0   0.0  0.000  0.001 0.001  4 0 no  0.064 0  0 
       1  98 LEU QB 68 no 100.0   0.0  0.000  0.062 0.062  2 0 no  0.551 0  1 
       1  98 LEU QD 60 no   0.0   0.0  0.000  0.063 0.063  4 4 no  0.450 0  0 
       1  99 SER QB 59 no 100.0   0.0  0.000  0.063 0.063  4 4 no  0.450 0  0 
       1 101 PRO QB 43 no 100.0   0.0  0.000  0.032 0.032  4 0 no  0.342 0  0 
       1 103 PHE QB 42 no 100.0  99.3  1.049  1.056 0.007  4 0 no  0.242 0  0 
       1 105 TYR QB 15 no 100.0  97.5  2.588  2.654 0.066  9 0 no  0.364 0  0 
       1 106 GLU QG 67 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1 108 ILE QG 66 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1 109 ASN QB 21 no 100.0  99.2  1.135  1.145 0.010  7 2 no  0.191 0  0 
       1 110 ARG QB 24 no 100.0 100.0  0.567  0.567 0.000  6 0 no  0.004 0  0 
       1 110 ARG QG 65 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
       1 112 SER QB 58 no 100.0   0.0  0.000  0.009 0.009  4 4 no  0.219 0  0 
       1 113 LYS QG 64 no 100.0   0.0  0.000  0.002 0.002  2 0 no  0.127 0  0 
       1 115 CYS QB 36 no 100.0   0.0  0.000  0.009 0.009  6 4 no  0.219 0  0 
       1 116 GLY QA  9 no  80.0  48.2  0.023  0.048 0.025 12 2 no  0.191 0  0 
       1 117 PRO QB  7 no 100.0  99.3  0.689  0.694 0.005 14 4 no  0.193 0  0 
       1 118 LEU QB 41 no 100.0  96.1  2.496  2.598 0.102  4 0 no  0.617 0  1 
       1 118 LEU QD  1 no 100.0  99.9 21.370 21.397 0.027 27 3 no  0.211 0  0 
       1 119 TYR QB 19 no 100.0   0.0  0.000  0.016 0.016  8 4 no  0.299 0  0 
       1 120 GLN QG 23 no 100.0   0.0  0.000  0.037 0.037  6 0 no  0.394 0  0 
       1 121 TRP QB  5 no 100.0  99.2  2.193  2.210 0.017 17 5 no  0.216 0  0 
       1 122 VAL QG 16 no   0.0   0.0  0.000  0.036 0.036  8 0 no  0.373 0  0 
       1 123 ASN QB 40 no 100.0   0.0  0.000  0.090 0.090  4 0 no  0.652 0  1 
       1 126 ILE QG 39 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000 0  0 
       1 132 LEU QB 57 no 100.0   0.0  0.000  0.000 0.000  4 4 no  0.000 0  0 
       1 132 LEU QD 56 no 100.0   0.0  0.000  0.000 0.000  4 4 no  0.000 0  0 
       1 134 ASN QB 38 no 100.0   0.0  0.000  0.001 0.001  4 0 no  0.092 0  0 
       1 135 VAL QG 63 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000 0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 11, 2024 9:35:24 AM GMT (wattos1)