NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
637930 6ivs 36220 cing 4-filtered-FRED Wattos check stereo assignment distance


data_6ivs


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        69
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.069
    _Stereo_assign_list.Total_e_high_states  105.988
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  2 MET QB 65 no  25.0 100.0  0.001  0.001 0.000  4  1 no 0.000 0 0 
       1  2 MET QG 68 no 100.0   0.0  0.000  0.000 0.000  1  0 no 0.000 0 0 
       1  3 ASN QD 30 no 100.0 100.0  0.548  0.548 0.000 24  6 no 0.053 0 0 
       1  4 ARG QB 38 no 100.0 100.0  1.277  1.278 0.001 21  6 no 0.050 0 0 
       1  4 ARG QD 17 no 100.0  99.5  0.619  0.622 0.003 31 10 no 0.108 0 0 
       1  4 ARG QG 58 no 100.0 100.0  0.366  0.366 0.000 10  4 no 0.006 0 0 
       1  5 LEU QB 11 no 100.0  98.6  0.079  0.080 0.001 37 14 no 0.064 0 0 
       1  5 LEU QD 28 no 100.0 100.0 19.705 19.705 0.000 25  9 no 0.021 0 0 
       1  6 GLY QA  6 no  95.0  84.7  0.001  0.001 0.000 42  8 no 0.043 0 0 
       1  7 ILE QG 12 no 100.0  99.7  0.074  0.074 0.000 37 20 no 0.031 0 0 
       1  8 ILE QG  3 no 100.0  99.9  0.944  0.945 0.001 51 29 no 0.052 0 0 
       1  9 TYR QB 26 no 100.0 100.0  1.872  1.872 0.000 26  9 no 0.015 0 0 
       1 10 GLU QB 24 no 100.0 100.0  1.021  1.021 0.000 27 12 no 0.036 0 0 
       1 10 GLU QG 39 no  45.0  71.6  0.002  0.003 0.001 20 10 no 0.065 0 0 
       1 11 ILE QG 18 no 100.0 100.0  4.510  4.512 0.001 31 12 no 0.103 0 0 
       1 12 GLN QB 23 no 100.0  99.8  0.588  0.590 0.001 28 19 no 0.139 0 0 
       1 12 GLN QE 49 no  80.0  99.7  0.640  0.641 0.002 17 12 no 0.103 0 0 
       1 12 GLN QG 54 no  15.0  84.1  0.005  0.006 0.001 14 10 no 0.139 0 0 
       1 13 GLY QA 43 no  10.0  96.3  0.000  0.000 0.000 18  3 no 0.008 0 0 
       1 14 MET QB 57 no  95.0 100.0  0.127  0.127 0.000 13  9 no 0.000 0 0 
       1 14 MET QG 56 no  85.0 100.0  0.409  0.409 0.000 13  8 no 0.006 0 0 
       1 15 LYS QB 20 no  20.0  54.4  0.001  0.002 0.001 31 20 no 0.053 0 0 
       1 15 LYS QE 32 no  95.0  99.3  0.292  0.294 0.002 24 16 no 0.109 0 0 
       1 15 LYS QG 19 no 100.0 100.0  1.609  1.609 0.000 31 18 no 0.010 0 0 
       1 17 VAL QG  2 no 100.0  99.9  3.848  3.850 0.002 53 26 no 0.069 0 0 
       1 18 VAL QG 40 no 100.0 100.0 12.563 12.564 0.000 19  4 no 0.069 0 0 
       1 19 LEU QB  4 no 100.0  99.1  0.299  0.302 0.003 46 23 no 0.099 0 0 
       1 19 LEU QD  1 no 100.0 100.0 21.623 21.623 0.001 59 18 no 0.051 0 0 
       1 21 SER QB 59 no  90.0 100.0  0.331  0.331 0.000  9  1 no 0.037 0 0 
       1 22 GLU QB 42 no 100.0 100.0  0.320  0.320 0.000 19  9 no 0.008 0 0 
       1 22 GLU QG 45 no  80.0  99.2  0.247  0.249 0.002 18  9 no 0.066 0 0 
       1 23 GLY QA 41 no 100.0 100.0  0.093  0.093 0.000 19  6 no 0.000 0 0 
       1 24 GLU QB 52 no 100.0 100.0  0.255  0.255 0.000 14  6 no 0.019 0 0 
       1 25 PHE QB 22 no 100.0 100.0  2.228  2.229 0.001 28  6 no 0.044 0 0 
       1 26 LEU QD  8 no 100.0 100.0  5.691  5.693 0.001 41 11 no 0.120 0 0 
       1 27 ILE QG 51 no 100.0 100.0  0.160  0.160 0.000 16  6 no 0.008 0 0 
       1 28 ILE QG 13 no 100.0  99.9  0.354  0.354 0.000 35  1 no 0.045 0 0 
       1 29 ARG QG 34 no  95.0 100.0  0.392  0.392 0.000 23  7 no 0.053 0 0 
       1 30 ARG QB 16 no 100.0  99.9  1.173  1.174 0.001 33  8 no 0.076 0 0 
       1 30 ARG QG 37 no  95.0  98.8  0.016  0.017 0.000 21  6 no 0.040 0 0 
       1 31 ARG QB 36 no  90.0  98.3  0.051  0.052 0.001 22 13 no 0.053 0 0 
       1 31 ARG QD 48 no  50.0 100.0  0.054  0.054 0.000 17  9 no 0.007 0 0 
       1 31 ARG QG 61 no  75.0  94.8  0.014  0.014 0.001  9  9 no 0.052 0 0 
       1 32 LYS QB 62 no 100.0 100.0  0.287  0.287 0.000  7  1 no 0.000 0 0 
       1 33 ASP QB 69 no 100.0   0.0  0.000  0.000 0.000  1  1 no 0.000 0 0 
       1 34 MET QB  9 no 100.0  99.1  0.120  0.121 0.001 39 22 no 0.057 0 0 
       1 34 MET QG  5 no 100.0  99.8  0.917  0.919 0.002 43 15 no 0.109 0 0 
       1 35 LYS QB 35 no  50.0  88.8  0.064  0.072 0.008 22  7 no 0.125 0 0 
       1 36 VAL QG 14 no 100.0 100.0  3.045  3.046 0.001 35 16 no 0.053 0 0 
       1 37 GLY QA 33 no 100.0 100.0  0.079  0.079 0.000 23  4 no 0.015 0 0 
       1 38 GLN QE 25 no 100.0  99.9  1.260  1.261 0.001 26  7 no 0.077 0 0 
       1 39 GLN QB 31 no  60.0  94.3  0.002  0.003 0.000 24 11 no 0.033 0 0 
       1 39 GLN QE 46 no  95.0 100.0  0.270  0.270 0.000 18 12 no 0.026 0 0 
       1 39 GLN QG 27 no 100.0 100.0  0.379  0.379 0.000 26 13 no 0.011 0 0 
       1 40 VAL QG  7 no 100.0 100.0  6.343  6.343 0.001 42 18 no 0.049 0 0 
       1 42 PHE QB 15 no 100.0  99.3  0.611  0.615 0.004 34  5 no 0.110 0 0 
       1 43 GLU QB 47 no 100.0  99.8  2.790  2.797 0.007 17  1 no 0.117 0 0 
       1 43 GLU QG 66 no  45.0  92.8  0.027  0.029 0.002  3  0 no 0.098 0 0 
       1 44 ASN QD 29 no  95.0  99.9  0.345  0.346 0.000 24  3 no 0.061 0 0 
       1 45 GLU QB 60 no 100.0   0.0  0.000  0.000 0.000  9  4 no 0.000 0 0 
       1 45 GLU QG 44 no 100.0  22.8  0.001  0.004 0.003 18  6 no 0.140 0 0 
       1 46 ASP QB 50 no 100.0  90.6  0.030  0.033 0.003 16  3 no 0.108 0 0 
       1 47 ILE QG 21 no 100.0 100.0  0.660  0.660 0.000 28  4 no 0.003 0 0 
       1 48 TYR QB 10 no 100.0  99.9  3.150  3.152 0.002 38  8 no 0.084 0 0 
       1 49 ASN QB 55 no 100.0   0.0  0.000  0.000 0.000 13  8 no 0.000 0 0 
       1 49 ASN QD 53 no 100.0  99.9  1.028  1.029 0.001 14  9 no 0.120 0 0 
       1 50 VAL QG 67 no 100.0 100.0  0.109  0.109 0.000  2  0 no 0.000 0 0 
       1 51 ARG QB 63 no 100.0   0.0  0.000  0.000 0.000  5  0 no 0.000 0 0 
       1 53 LYS QB 64 no  20.0  76.6  0.002  0.003 0.001  4  0 no 0.078 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 11, 2024 10:08:59 PM GMT (wattos1)