NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
635755 6hz2 34322 cing 4-filtered-FRED Wattos check stereo assignment distance


data_6hz2


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        20
    _Stereo_assign_list.Swap_count           7
    _Stereo_assign_list.Swap_percentage      35.0
    _Stereo_assign_list.Deassign_count       14
    _Stereo_assign_list.Deassign_percentage  70.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   57.283
    _Stereo_assign_list.Total_e_high_states  162.186
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  1 GLY QA 16 no  100.0  0.0  0.000  0.000  0.000  6 0 no  0.000  0  0 
       1  2 ILE QG 12 yes  75.0 18.9  0.996  5.274  4.277  7 0 yes 2.667 15 23 
       1  3 GLY QA 11 no   95.0 18.7  0.298  1.596  1.298  7 0 yes 1.157  3 34 
       1  5 LYS QG 19 no   55.0  1.8  0.134  7.506  7.372  4 0 yes 3.837 30 36 
       1  7 LEU QB  8 yes 100.0 35.4  3.063  8.657  5.594  8 0 yes 2.378 26 59 
       1  8 SER QB  7 no   95.0 61.0  3.040  4.982  1.942  8 0 yes 1.383 26 28 
       1 10 LEU QB 17 no   35.0  5.3  0.002  0.039  0.037  6 2 no  0.000  0  0 
       1 10 LEU QD  5 no   25.0 51.9  3.111  5.992  2.881 11 3 yes 1.965  8 26 
       1 11 LYS QB  4 no   95.0 13.4  0.481  3.592  3.111 11 1 yes 1.641 34 36 
       1 15 LYS QB 10 no   35.0  1.2  0.008  0.644  0.636  7 0 yes 0.982  0 15 
       1 15 LYS QD 18 yes 100.0 54.9  5.277  9.614  4.337  4 0 yes 2.566 33 55 
       1 19 LYS QG 15 no   80.0 83.8  0.023  0.027  0.004  6 0 no  0.231  0  0 
       1 20 GLU QB  6 no   90.0 90.9  1.184  1.303  0.119  8 0 no  0.911  0  3 
       1 23 SER QB 14 no  100.0  0.0  0.000  0.000  0.000  6 0 no  0.000  0  0 
       1 25 TYR QB 13 yes 100.0 57.4  0.929  1.620  0.691  7 1 yes 1.972  3 12 
       1 25 TYR QD  3 yes 100.0 89.2 31.496 35.315  3.819 12 2 yes 3.816 14 20 
       1 25 TYR QE  2 yes 100.0 78.2 42.843 54.787 11.943 12 2 yes 4.500 53 93 
       1 26 LEU QB  9 yes 100.0 89.2  1.129  1.266  0.137  8 1 yes 1.461  1  1 
       1 26 LEU QD  1 no   75.0 54.5 10.888 19.972  9.084 13 6 yes 3.801 32 41 
       1 27 HIS QB 20 no  100.0  0.0  0.000  0.000  0.000  2 0 no  0.000  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, May 12, 2024 10:44:02 AM GMT (wattos1)