NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
631266 6grv 34282 cing 4-filtered-FRED Wattos check stereo assignment distance


data_6grv


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        60
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.454
    _Stereo_assign_list.Total_e_high_states  83.118
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  3 LEU QD  5 no 100.0  99.9  6.025  6.032 0.007 13 0 no 0.147 0 0 
       1  5 CYS QB  4 no 100.0  98.3  1.630  1.658 0.028 15 4 no 0.232 0 0 
       1  6 GLY QA 28 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.000 0 0 
       1  7 CYS QB 27 no 100.0   0.0  0.000  0.003 0.003  6 0 no 0.110 0 0 
       1  8 PRO QB 41 no 100.0  98.3  0.665  0.676 0.012  3 0 no 0.193 0 0 
       1  8 PRO QD 58 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  9 ASP QB 57 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 10 CYS QB 26 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.000 0 0 
       1 11 HIS QB 56 no 100.0 100.0  0.230  0.230 0.000  2 0 no 0.000 0 0 
       1 12 CYS QB 18 no 100.0  99.9  1.340  1.342 0.002  9 3 no 0.114 0 0 
       1 13 LYS QG 55 no 100.0   0.0  0.000  0.001 0.001  2 0 no 0.134 0 0 
       1 14 VAL QG  1 no 100.0  99.6 16.842 16.904 0.062 36 8 no 0.232 0 0 
       1 15 ASP QB 10 no 100.0  98.4  3.236  3.290 0.054 12 6 no 0.351 0 0 
       1 16 PRO QD 22 no 100.0  95.5  0.415  0.434 0.020  7 2 no 0.351 0 0 
       1 18 ARG QB 23 no 100.0 100.0  3.645  3.646 0.001  7 3 no 0.094 0 0 
       1 19 VAL QG  2 no 100.0  99.9 10.815 10.830 0.015 29 6 no 0.161 0 0 
       1 20 PHE QB 11 no 100.0  99.6  2.274  2.282 0.008 11 2 no 0.151 0 0 
       1 21 ASN QB 17 no 100.0  95.0  0.255  0.268 0.013 10 4 no 0.159 0 0 
       1 21 ASN QD 13 no  95.0  98.1  0.252  0.257 0.005 11 3 no 0.145 0 0 
       1 22 HIS QB  7 no 100.0  99.3  1.007  1.014 0.007 12 1 no 0.144 0 0 
       1 23 ASP QB 21 no 100.0  99.8  1.995  1.999 0.004  7 1 no 0.113 0 0 
       1 25 GLU QB 20 no 100.0  99.6  3.280  3.292 0.012  7 1 no 0.157 0 0 
       1 27 TYR QB  9 no 100.0  99.3  1.721  1.732 0.011 12 2 no 0.157 0 0 
       1 28 CYS QB 60 no 100.0   0.0  0.000  0.000 0.000  2 2 no 0.000 0 0 
       1 29 SER QB  8 no 100.0  99.1  1.919  1.937 0.018 12 2 no 0.216 0 0 
       1 30 GLN QE 54 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 32 CYS QB  3 no 100.0  99.9  4.197  4.204 0.006 16 0 no 0.102 0 0 
       1 34 GLU QG 25 no 100.0   0.0  0.000  0.020 0.020  6 0 no 0.170 0 0 
       1 35 GLN QB 40 no 100.0 100.0  0.598  0.598 0.000  3 0 no 0.000 0 0 
       1 35 GLN QG 37 no 100.0   0.0  0.000  0.009 0.009  4 0 no 0.182 0 0 
       1 36 HIS QB  6 no 100.0  99.6  3.553  3.566 0.013 12 1 no 0.173 0 0 
       1 37 PRO QB 59 no 100.0   0.0  0.000  0.003 0.003  2 2 no 0.147 0 0 
       1 37 PRO QD 36 no 100.0 100.0  0.928  0.928 0.000  4 0 no 0.030 0 0 
       1 37 PRO QG 29 no 100.0 100.0  1.214  1.214 0.000  5 2 no 0.057 0 0 
       1 38 ASN QD 16 no 100.0  98.2  1.378  1.402 0.025 10 4 no 0.375 0 0 
       1 39 GLY QA 19 no 100.0  99.8  1.334  1.337 0.003  7 1 no 0.143 0 0 
       1 40 GLU QG 53 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 41 PRO QB 52 no 100.0 100.0  0.617  0.617 0.000  2 0 no 0.000 0 0 
       1 42 CYS QB 12 no 100.0  99.9  6.168  6.175 0.007 11 3 no 0.198 0 0 
       1 43 PRO QB 38 no 100.0  96.6  1.368  1.416 0.048  4 3 no 0.298 0 0 
       1 43 PRO QD 35 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1 45 PRO QD 24 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.000 0 0 
       1 47 CYS QB 15 no 100.0  96.6  0.505  0.522 0.018 10 0 no 0.263 0 0 
       1 49 CYS QB 14 no 100.0  99.3  0.358  0.361 0.003 10 0 no 0.098 0 0 
       1 50 GLU QG 34 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1 51 ARG QB 33 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1 53 GLY QA 51 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 55 VAL QG 50 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 58 ARG QB 49 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 59 ASP QB 32 no 100.0   0.0  0.000  0.001 0.001  4 0 no 0.081 0 0 
       1 60 ILE QG 48 no   0.0   0.0  0.000  0.004 0.004  2 0 no 0.211 0 0 
       1 62 ASN QD 47 no 100.0 100.0  0.666  0.666 0.000  2 0 no 0.024 0 0 
       1 63 ASN QB 31 no  85.0  99.8  1.185  1.188 0.003  4 0 no 0.139 0 0 
       1 63 ASN QD 46 no 100.0   0.0  0.000  0.002 0.002  2 0 no 0.180 0 0 
       1 64 GLN QB 30 no 100.0   0.0  0.000  0.003 0.003  4 0 no 0.160 0 0 
       1 65 LEU QD 45 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 69 LEU QD 44 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 70 GLU QB 43 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 71 GLU QB 42 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 74 PRO QD 39 no 100.0  99.9  1.051  1.053 0.001  3 0 no 0.132 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 10, 2024 3:37:39 PM GMT (wattos1)