NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
619898 5tgw 30185 cing 4-filtered-FRED Wattos check stereo assignment distance


data_5tgw


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        74
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.201
    _Stereo_assign_list.Total_e_high_states  23.779
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  12 GLU QG 23 no 100.0   0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1  13 LEU QB 46 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  13 LEU QD  2 no  75.0  99.8 0.611 0.613 0.001 17 2 no 0.090 0 0 
       1  14 VAL QG  4 no 100.0  99.9 3.390 3.394 0.005 14 2 no 0.268 0 0 
       1  15 GLN QG 74 no 100.0   0.0 0.000 0.013 0.013  2 0 no 0.407 0 0 
       1  17 PHE QB 22 no 100.0   0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1  18 GLN QB 45 no 100.0   0.0 0.000 0.005 0.005  4 0 no 0.090 0 0 
       1  18 GLN QG 48 no 100.0   0.0 0.000 0.005 0.005  4 2 no 0.268 0 0 
       1  19 ARG QB 44 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  20 LEU QB 43 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  20 LEU QD  9 no 100.0 100.0 1.149 1.149 0.000 10 2 no 0.029 0 0 
       1  21 ARG QB 21 no 100.0   0.0 0.000 0.007 0.007  6 0 no 0.161 0 0 
       1  22 GLU QB 42 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  22 GLU QG 73 no 100.0   0.0 0.000 0.008 0.008  2 0 no 0.254 0 0 
       1  23 ILE QG 41 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  24 PHE QB 25 no 100.0   0.0 0.000 0.000 0.000  6 2 no 0.000 0 0 
       1  25 ASP QB 20 no 100.0   0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1  28 ASP QB 40 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  31 SER QB 39 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.014 0 0 
       1  32 LEU QB 38 no 100.0   0.0 0.000 0.001 0.001  4 0 no 0.084 0 0 
       1  32 LEU QD  7 no  65.0  99.3 0.308 0.310 0.002 13 2 no 0.091 0 0 
       1  35 VAL QG  3 no 100.0 100.0 1.301 1.301 0.000 16 1 no 0.000 0 0 
       1  36 LEU QB 37 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  36 LEU QD 14 no  55.0  39.8 0.001 0.003 0.002  7 2 no 0.091 0 0 
       1  37 GLU QB 72 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  38 GLU QB 19 no 100.0   0.0 0.000 0.005 0.005  6 0 no 0.151 0 0 
       1  38 GLU QG 71 no   0.0   0.0 0.000 0.025 0.025  2 0 no 0.294 0 0 
       1  39 ILE QG 36 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  40 GLU QB 70 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  41 GLU QB 69 no 100.0   0.0 0.000 0.007 0.007  2 0 no 0.140 0 0 
       1  41 GLU QG 68 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  42 LEU QB 24 no 100.0   0.0 0.000 0.000 0.000  6 2 no 0.043 0 0 
       1  42 LEU QD  8 no 100.0 100.0 2.630 2.631 0.000 10 0 no 0.027 0 0 
       1  43 ILE QG 67 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  45 LYS QG 66 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  46 HIS QB 35 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  48 GLN QG 65 no   0.0   0.0 0.000 0.005 0.005  2 0 no 0.123 0 0 
       1  49 LEU QB 64 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  49 LEU QD 26 no  95.0  99.8 0.891 0.893 0.002  5 0 no 0.197 0 0 
       1  69 VAL QG  6 no 100.0 100.0 3.719 3.721 0.002 13 2 no 0.189 0 0 
       1  70 GLN QG 63 no 100.0   0.0 0.000 0.003 0.003  2 0 no 0.123 0 0 
       1  71 LEU QB 18 no 100.0   0.0 0.000 0.000 0.000  6 0 no 0.044 0 0 
       1  71 LEU QD 34 no  35.0  98.4 0.167 0.170 0.003  4 0 no 0.116 0 0 
       1  72 PHE QB 33 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  73 GLN QB 32 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.014 0 0 
       1  73 GLN QG 47 no 100.0   0.0 0.000 0.000 0.000  4 2 no 0.016 0 0 
       1  74 ARG QB 62 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  75 PHE QB 31 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  76 ARG QB 30 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  77 GLU QB 29 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  77 GLU QG 61 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.027 0 0 
       1  79 ILE QG 60 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  80 ASP QB 17 no 100.0   0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1  81 LYS QB 28 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  83 ASP QB 16 no 100.0   0.0 0.000 0.000 0.000  6 0 no 0.038 0 0 
       1  87 LEU QB 15 no 100.0   0.0 0.000 0.000 0.000  6 0 no 0.089 0 0 
       1  87 LEU QD 13 no 100.0  98.6 1.213 1.230 0.017  7 1 no 0.203 0 0 
       1  88 GLU QB 59 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.033 0 0 
       1  89 GLN QG 58 no   0.0   0.0 0.000 0.008 0.008  2 0 no 0.164 0 0 
       1  90 LEU QD  1 no  95.0  99.8 2.377 2.382 0.005 17 1 no 0.310 0 0 
       1  91 LEU QB 57 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  91 LEU QD  5 no 100.0 100.0 2.527 2.527 0.001 13 2 no 0.079 0 0 
       1  94 LEU QB 56 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  94 LEU QD 12 no 100.0 100.0 2.326 2.326 0.001  7 1 no 0.069 0 0 
       1  95 GLU QG 55 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.020 0 0 
       1  96 GLN QG 54 no   0.0   0.0 0.000 0.027 0.027  2 0 no 0.322 0 0 
       1  98 LEU QB 53 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  98 LEU QD 11 no  75.0  99.9 0.263 0.263 0.000  7 0 no 0.059 0 0 
       1 101 ILE QG 52 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1 102 ARG QB 51 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1 103 GLU QG 50 no 100.0   0.0 0.000 0.029 0.029  2 0 no 0.369 0 0 
       1 104 LEU QB 27 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1 104 LEU QD 10 no  95.0  98.3 0.704 0.716 0.012  8 0 no 0.488 0 0 
       1 106 GLU QG 49 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Monday, May 13, 2024 10:54:23 PM GMT (wattos1)