NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
617785 5msl 34082 cing 4-filtered-FRED Wattos check stereo assignment distance


data_5msl


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        104
    _Stereo_assign_list.Swap_count           1
    _Stereo_assign_list.Swap_percentage      1.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.428
    _Stereo_assign_list.Total_e_high_states  3.628
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  3 MET QB  99 no   35.0  65.2 0.005 0.007 0.003  2  0 no 0.126 0 0 
       1  3 MET QG 102 no  100.0 100.0 0.000 0.000 0.000  1  0 no 0.041 0 0 
       1  5 LEU QB   6 no  100.0  99.1 0.043 0.043 0.000 18  6 no 0.432 0 0 
       1  5 LEU QD   3 no   95.0  86.3 0.225 0.260 0.036 20  4 no 0.227 0 0 
       1  6 HIS QB  15 no  100.0 100.0 0.012 0.012 0.000 14  0 no 0.208 0 0 
       1  7 TYR QB  12 no   85.0  90.7 0.008 0.008 0.001 16  4 no 0.090 0 0 
       1  8 TYR QB  41 no  100.0 100.0 0.000 0.000 0.000  8  1 no 0.032 0 0 
       1  9 CYS QB   5 yes  95.0  92.9 0.122 0.132 0.009 18  5 no 0.301 0 0 
       1 10 ARG QB  26 no   10.0 100.0 0.000 0.000 0.000 11  4 no 0.000 0 0 
       1 10 ARG QD  46 no   55.0  96.8 0.021 0.022 0.001  8  5 no 0.659 0 1 
       1 10 ARG QG  30 no  100.0  79.9 0.000 0.000 0.000 10  4 no 0.091 0 0 
       1 11 HIS QB  40 no  100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 12 CYS QB  62 no   15.0  95.6 0.000 0.000 0.000  6  0 no 0.012 0 0 
       1 13 GLY QA  61 no  100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 14 VAL QG   2 no   85.0  60.2 0.039 0.064 0.025 21  6 no 0.133 0 0 
       1 15 LYS QB  19 no  100.0 100.0 0.008 0.008 0.000 13  4 no 0.339 0 0 
       1 15 LYS QD 104 no  100.0   0.0 0.000 0.000 0.000  1  1 no 0.000 0 0 
       1 15 LYS QG  20 no   75.0  85.5 0.003 0.004 0.001 13  5 no 0.058 0 0 
       1 16 VAL QG   1 no   95.0  97.6 1.679 1.721 0.042 35 12 no 0.180 0 0 
       1 17 GLY QA  98 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 18 SER QB  67 no   85.0  89.7 0.002 0.002 0.000  5  0 no 0.122 0 0 
       1 19 LEU QB  53 no   55.0  90.0 0.002 0.002 0.000  7  3 no 0.045 0 0 
       1 19 LEU QD  36 no  100.0  96.5 0.034 0.036 0.001  9  5 no 0.084 0 0 
       1 20 GLU QB  97 no   10.0   4.3 0.000 0.000 0.000  2  0 no 0.041 0 0 
       1 20 GLU QG  93 no   25.0  99.9 0.002 0.002 0.000  3  2 no 0.006 0 0 
       1 21 SER QB  60 no   85.0  63.4 0.017 0.027 0.010  6  0 no 0.432 0 0 
       1 22 SER QB  75 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 23 MET QB  34 no   75.0  32.6 0.001 0.003 0.002  9  4 no 0.150 0 0 
       1 23 MET QG  45 no   25.0  71.9 0.002 0.003 0.001  8  4 no 0.083 0 0 
       1 24 VAL QG  49 no   40.0  88.9 0.038 0.043 0.005  7  0 no 0.131 0 0 
       1 25 SER QB  59 no   50.0  70.6 0.002 0.003 0.001  6  0 no 0.087 0 0 
       1 27 ASP QB  96 no   40.0  89.6 0.002 0.002 0.000  2  0 no 0.066 0 0 
       1 28 SER QB  58 no   50.0  49.6 0.004 0.009 0.004  6  0 no 0.118 0 0 
       1 29 LEU QB  18 no   85.0  96.5 0.012 0.012 0.000 13  4 no 0.151 0 0 
       1 29 LEU QD  11 no   60.0  65.0 0.034 0.053 0.018 16  4 no 0.224 0 0 
       1 30 GLY QA  57 no  100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 31 PHE QB  17 no   35.0  79.4 0.018 0.023 0.005 13  3 no 0.170 0 0 
       1 32 GLN QB  65 no   35.0  44.2 0.004 0.010 0.005  6  2 no 0.293 0 0 
       1 32 GLN QE  84 no   95.0  99.4 0.004 0.004 0.000  4  3 no 0.293 0 0 
       1 32 GLN QG  82 no   30.0  28.2 0.001 0.004 0.003  4  2 no 0.210 0 0 
       1 33 HIS QB  68 no  100.0   0.0 0.000 0.000 0.000  5  1 no 0.000 0 0 
       1 34 LEU QB  24 no   55.0  70.7 0.009 0.013 0.004 11  0 no 0.125 0 0 
       1 34 LEU QD  14 no   60.0  69.8 0.017 0.024 0.007 15  3 no 0.170 0 0 
       1 36 ASN QB  72 no  100.0 100.0 0.000 0.000 0.000  5  2 no 0.015 0 0 
       1 36 ASN QD  81 no   85.0  83.3 0.001 0.001 0.000  4  2 no 0.143 0 0 
       1 37 GLU QB  95 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 37 GLU QG  88 no   55.0  57.3 0.008 0.014 0.006  3  0 no 0.432 0 0 
       1 38 GLU QB  39 no   95.0  54.5 0.001 0.001 0.000  8  0 no 0.130 0 0 
       1 38 GLU QG  94 no   10.0  77.7 0.000 0.000 0.000  2  0 no 0.029 0 0 
       1 39 ARG QB  22 no   25.0  61.5 0.002 0.004 0.001 12  3 no 0.102 0 0 
       1 39 ARG QD  71 no  100.0   0.0 0.000 0.000 0.000  5  2 no 0.000 0 0 
       1 39 ARG QG  27 no   90.0  19.4 0.001 0.005 0.004 11  5 no 0.145 0 0 
       1 40 ASN QB  70 no  100.0   0.0 0.000 0.000 0.000  5  2 no 0.000 0 0 
       1 40 ASN QD  69 no  100.0 100.0 0.000 0.000 0.000  5  2 no 0.061 0 0 
       1 41 ASP QB  87 no  100.0   0.0 0.000 0.000 0.000  3  0 no 0.000 0 0 
       1 42 MET QB  91 no  100.0   0.0 0.000 0.000 0.000  3  1 no 0.000 0 0 
       1 42 MET QG  80 no    5.0 100.0 0.000 0.000 0.000  4  1 no 0.000 0 0 
       1 43 ILE QG  23 no   15.0  87.5 0.002 0.002 0.000 11  0 no 0.055 0 0 
       1 44 SER QB  79 no   20.0  54.8 0.004 0.007 0.003  4  1 no 0.209 0 0 
       1 45 TYR QB  28 no   40.0  53.6 0.004 0.007 0.003 10  1 no 0.209 0 0 
       1 46 LYS QB  29 no   40.0  50.0 0.000 0.000 0.000 10  2 no 0.051 0 0 
       1 46 LYS QD 101 no  100.0 100.0 0.000 0.000 0.000  2  1 no 0.058 0 0 
       1 46 LYS QE 103 no  100.0   0.0 0.000 0.000 0.000  1  1 no 0.000 0 0 
       1 46 LYS QG  92 no  100.0   0.0 0.000 0.000 0.000  3  2 no 0.000 0 0 
       1 47 GLU QB  90 no   75.0  65.9 0.010 0.015 0.005  3  1 no 0.168 0 0 
       1 47 GLU QG 100 no   60.0  13.8 0.002 0.016 0.013  2  1 no 0.168 0 0 
       1 48 ASN QB  55 no  100.0   0.0 0.000 0.000 0.000  7  4 no 0.000 0 0 
       1 48 ASN QD  85 no  100.0   0.0 0.000 0.000 0.000  4  4 no 0.000 0 0 
       1 49 GLY QA  74 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 50 ASP QB  50 no   85.0  40.4 0.002 0.005 0.003  7  1 no 0.164 0 0 
       1 51 VAL QG  10 no   65.0  94.0 0.216 0.230 0.014 16  4 no 0.229 0 0 
       1 52 HIS QB  42 no  100.0   0.0 0.000 0.000 0.000  8  2 no 0.000 0 0 
       1 53 VAL QG  16 no   95.0  76.2 0.006 0.008 0.002 14  1 no 0.159 0 0 
       1 54 LEU QB  25 no   40.0 100.0 0.001 0.001 0.000 11  4 no 0.000 0 0 
       1 54 LEU QD  13 no   60.0  99.7 0.068 0.068 0.000 16  5 no 0.042 0 0 
       1 56 ILE QG   9 no   90.0  77.9 0.029 0.038 0.008 16  3 no 0.659 0 1 
       1 57 CYS QB  35 no  100.0 100.0 0.000 0.000 0.000  9  5 no 0.042 0 0 
       1 58 GLU QB  78 no   80.0  89.1 0.001 0.002 0.000  4  1 no 0.150 0 0 
       1 58 GLU QG  77 no   25.0  36.6 0.000 0.000 0.000  4  1 no 0.023 0 0 
       1 59 ASP QB  33 no   75.0   4.9 0.000 0.001 0.001  9  0 no 0.103 0 0 
       1 60 CYS QB   7 no   65.0  86.1 0.012 0.014 0.002 17  2 no 0.326 0 0 
       1 61 GLN QB  44 no   80.0  95.3 0.094 0.099 0.005  8  3 no 0.667 0 5 
       1 61 GLN QE  37 no   65.0  95.5 0.025 0.026 0.001  9  6 no 0.088 0 0 
       1 61 GLN QG  66 no   75.0  39.3 0.008 0.021 0.013  6  3 no 0.373 0 0 
       1 62 GLU QB  64 no   55.0  18.1 0.005 0.029 0.024  6  1 no 0.210 0 0 
       1 62 GLU QG  63 no   55.0   8.2 0.001 0.011 0.010  6  1 no 0.194 0 0 
       1 64 LEU QB   8 no   90.0  71.8 0.025 0.035 0.010 17  7 no 0.516 0 1 
       1 64 LEU QD   4 no   75.0  70.3 0.256 0.364 0.108 18  5 no 0.667 0 5 
       1 65 ASP QB  51 no   85.0  90.1 0.031 0.035 0.003  7  2 no 0.373 0 0 
       1 66 ARG QB  43 no  100.0 100.0 0.000 0.000 0.000  8  3 no 0.065 0 0 
       1 66 ARG QD  73 no  100.0   0.0 0.000 0.000 0.000  5  4 no 0.000 0 0 
       1 66 ARG QG  52 no   15.0  99.8 0.001 0.001 0.000  7  3 no 0.008 0 0 
       1 67 ASN QB  31 no   15.0  73.9 0.003 0.004 0.001 10  6 no 0.094 0 0 
       1 67 ASN QD  83 no  100.0   0.0 0.000 0.000 0.000  4  3 no 0.000 0 0 
       1 68 PRO QB  54 no   10.0 100.0 0.000 0.000 0.000  7  4 no 0.000 0 0 
       1 68 PRO QD  21 no   20.0  78.9 0.001 0.001 0.000 13  8 no 0.039 0 0 
       1 68 PRO QG  47 no   90.0  78.1 0.001 0.001 0.000  8  7 no 0.094 0 0 
       1 69 HIS QB  56 no  100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 70 TYR QB  32 no   25.0  71.0 0.000 0.000 0.000  9  0 no 0.051 0 0 
       1 71 HIS QB  86 no   30.0  92.3 0.005 0.005 0.000  3  0 no 0.087 0 0 
       1 72 GLU QB  76 no    5.0 100.0 0.000 0.000 0.000  4  1 no 0.000 0 0 
       1 72 GLU QG  89 no   15.0 100.0 0.000 0.000 0.000  3  1 no 0.000 0 0 
       1 73 TYR QB  38 no  100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 74 HIS QB  48 no   25.0  63.4 0.000 0.001 0.000  7  0 no 0.040 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 17, 2024 10:31:29 PM GMT (wattos1)