NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
617177 5x3c 36056 cing 4-filtered-FRED Wattos check stereo assignment distance


data_5x3c


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        38
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.007
    _Stereo_assign_list.Total_e_high_states  79.735
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  2 GLN QB 24 no  30.0 100.0  0.002  0.002 0.000 26 20 no 0.000 0 0 
       1  2 GLN QE 38 no  15.0  99.8  0.051  0.051 0.000  8  7 no 0.032 0 0 
       1  2 GLN QG 19 no 100.0 100.0  0.982  0.982 0.000 31 24 no 0.041 0 0 
       1  3 SER QB 27 no 100.0   0.0  0.000  0.000 0.000 19  0 no 0.000 0 0 
       1  6 GLY QA 33 no  50.0  66.7  0.001  0.001 0.000 13  5 no 0.041 0 0 
       1  7 GLN QB  7 no 100.0 100.0  4.473  4.473 0.000 45 15 no 0.000 0 0 
       1  7 GLN QE 14 no 100.0 100.0  1.184  1.184 0.000 39 26 no 0.026 0 0 
       1  7 GLN QG  2 no 100.0 100.0  3.655  3.656 0.001 65 31 no 0.044 0 0 
       1  8 CYS QB 15 no 100.0 100.0  1.791  1.791 0.001 37 21 no 0.049 0 0 
       1  9 GLY QA 13 no 100.0  99.9  1.648  1.649 0.001 40 19 no 0.062 0 0 
       1 10 GLY QA 11 no 100.0  99.9  1.161  1.163 0.001 43 22 no 0.062 0 0 
       1 11 ILE QG 22 no 100.0 100.0  2.032  2.032 0.000 27  2 no 0.000 0 0 
       1 12 GLY QA 29 no  25.0 100.0  0.036  0.036 0.000 16  5 no 0.000 0 0 
       1 13 TYR QB  6 no 100.0 100.0  0.116  0.116 0.000 48 30 no 0.022 0 0 
       1 14 SER QB 34 no 100.0 100.0  0.000  0.000 0.000 11  1 no 0.031 0 0 
       1 15 GLY QA 35 no 100.0 100.0  0.754  0.754 0.000 11  3 no 0.029 0 0 
       1 16 PRO QB 21 no 100.0  98.3  0.000  0.000 0.000 28 18 no 0.033 0 0 
       1 16 PRO QD 25 no 100.0  99.9  0.064  0.064 0.000 26 25 no 0.029 0 0 
       1 16 PRO QG 16 no 100.0 100.0  1.227  1.227 0.000 36 28 no 0.032 0 0 
       1 18 VAL QG 30 no 100.0 100.0  0.203  0.203 0.000 16  6 no 0.000 0 0 
       1 19 CYS QB 23 no 100.0 100.0  2.277  2.277 0.000 27 16 no 0.021 0 0 
       1 22 GLY QA 37 no  60.0 100.0  0.004  0.004 0.000 10  3 no 0.000 0 0 
       1 25 CYS QB 26 no 100.0 100.0  0.459  0.459 0.000 22 12 no 0.019 0 0 
       1 26 GLN QB 20 no 100.0 100.0  0.712  0.712 0.000 28 13 no 0.017 0 0 
       1 26 GLN QE 36 no  35.0 100.0  0.046  0.046 0.000 11  6 no 0.000 0 0 
       1 26 GLN QG 17 no  90.0  99.6  0.059  0.059 0.000 35 17 no 0.039 0 0 
       1 27 VAL QG  3 no 100.0 100.0 29.811 29.811 0.000 58 12 no 0.041 0 0 
       1 28 LEU QB 12 no 100.0 100.0  1.182  1.182 0.000 41 17 no 0.033 0 0 
       1 28 LEU QD 18 no 100.0 100.0  4.757  4.757 0.000 33 12 no 0.000 0 0 
       1 29 ASN QD 31 no 100.0 100.0  0.705  0.706 0.000 16  8 no 0.038 0 0 
       1 30 PRO QB 10 no 100.0 100.0  0.292  0.292 0.000 43 21 no 0.007 0 0 
       1 30 PRO QD  5 no 100.0 100.0  2.532  2.532 0.000 53 29 no 0.026 0 0 
       1 30 PRO QG  9 no 100.0 100.0  0.614  0.614 0.000 44 29 no 0.000 0 0 
       1 31 TYR QB  8 no 100.0 100.0  0.611  0.611 0.000 44 18 no 0.019 0 0 
       1 33 SER QB  1 no 100.0 100.0  7.610  7.610 0.001 66 26 no 0.037 0 0 
       1 34 GLN QE 28 no 100.0 100.0  0.000  0.000 0.000 17  4 no 0.042 0 0 
       1 35 CYS QB  4 no 100.0 100.0  2.214  2.214 0.000 57 20 no 0.000 0 0 
       1 36 LEU QD 32 no 100.0 100.0  6.465  6.465 0.000 14  4 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 2, 2024 3:58:55 PM GMT (wattos1)