NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
576735 2mly 19836 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2mly


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        102
    _Stereo_assign_list.Swap_count           1
    _Stereo_assign_list.Swap_percentage      1.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          10
    _Stereo_assign_list.Total_e_low_states   2.264
    _Stereo_assign_list.Total_e_high_states  138.476
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1 126 VAL QG  98 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 128 LEU QD 101 no  100.0  99.6  6.784  6.812 0.028  2  0 no 0.211 0 0 
       1 136 VAL QG  40 no  100.0   0.0  0.000  0.000 0.000 16  8 no 0.000 0 0 
       1 141 VAL QG  24 no    0.0   0.0  0.000  0.014 0.014 20 16 no 0.139 0 0 
       1 143 VAL QG  97 no  100.0   0.0  0.000  0.026 0.026  4  0 no 0.175 0 0 
       1 152 LEU QD  54 no  100.0   0.0  0.000  0.075 0.075 12  8 no 0.240 0 0 
       1 162 TRP QB  36 no  100.0  96.1  2.064  2.148 0.084 16  0 no 0.238 0 0 
       1 163 LYS QB  69 no   90.0  63.0  0.030  0.048 0.018  8  0 no 0.171 0 0 
       1 164 GLU QG  19 no  100.0  97.9  5.538  5.658 0.120 20  0 no 0.230 0 0 
       1 165 LYS QE  58 no  100.0 100.0  0.002  0.002 0.000 10  2 no 0.090 0 0 
       1 166 ASP QB  96 no  100.0   0.0  0.000  0.003 0.003  4  0 no 0.103 0 0 
       1 167 GLY QA 100 no  100.0 100.0  0.016  0.016 0.000  2  0 no 0.164 0 0 
       1 169 VAL QG   2 no  100.0  99.8 30.662 30.738 0.076 54  6 no 0.205 0 0 
       1 173 ASP QB  20 no    0.0   0.0  0.000  0.005 0.005 20  4 no 0.124 0 0 
       1 174 ARG QB  47 no  100.0   0.0  0.000  0.000 0.000 12  0 no 0.000 0 0 
       1 175 VAL QG  16 no  100.0  98.7  8.821  8.938 0.117 22  0 no 0.306 0 0 
       1 177 ILE QG  35 no  100.0  98.4  0.266  0.270 0.004 16  0 no 0.076 0 0 
       1 179 PHE QB   8 no  100.0  68.9  0.251  0.365 0.114 28  8 no 0.264 0 0 
       1 181 GLY QA  15 no  100.0 100.0  0.072  0.072 0.000 22  0 no 0.260 0 0 
       1 182 SER QB   7 no  100.0  96.8  2.261  2.336 0.075 28  2 no 0.290 0 0 
       1 183 VAL QG  26 no   30.0   8.5  0.004  0.044 0.040 18  0 no 0.255 0 0 
       1 185 GLY QA 102 no  100.0 100.0  0.019  0.019 0.000  2  2 no 0.290 0 0 
       1 186 GLU QB  68 no  100.0   0.0  0.000  0.003 0.003  8  0 no 0.106 0 0 
       1 188 PHE QB  95 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 190 GLY QA  94 no  100.0 100.0  0.020  0.020 0.000  4  0 no 0.223 0 0 
       1 191 GLY QA  93 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 192 LYS QG  46 no  100.0   0.0  0.000  0.005 0.005 12  0 no 0.116 0 0 
       1 194 SER QB  34 no  100.0  99.9  2.471  2.473 0.002 16  0 no 0.073 0 0 
       1 195 ASP QB  77 no   50.0 100.0  0.002  0.002 0.000  6  0 no 0.000 0 0 
       1 196 PHE QB  14 no  100.0  98.8  2.202  2.228 0.026 22  0 no 0.151 0 0 
       1 197 VAL QG  42 no  100.0  97.4  1.112  1.141 0.029 14  0 no 0.169 0 0 
       1 198 LEU QB   3 no  100.0  96.1  2.741  2.854 0.112 36  8 no 0.270 0 0 
       1 198 LEU QD   6 no   20.0  69.5  0.143  0.206 0.063 30  8 no 0.282 0 0 
       1 200 MET QG  13 no  100.0  99.4  2.979  2.997 0.018 22  0 no 0.185 0 0 
       1 202 GLN QG  33 no  100.0  98.4  1.448  1.472 0.024 16  0 no 0.190 0 0 
       1 209 PHE QB  50 no  100.0   0.0  0.000  0.014 0.014 12  4 no 0.209 0 0 
       1 211 ASP QB  67 no  100.0   0.0  0.000  0.044 0.044  8  0 no 0.220 0 0 
       1 212 GLY QA  32 no  100.0   0.0  0.000  0.000 0.000 16  0 no 0.038 0 0 
       1 214 LYS QD  92 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 215 GLY QA  91 no  100.0   0.0  0.000  0.003 0.003  4  0 no 0.107 0 0 
       1 217 LYS QB  45 no  100.0   0.0  0.000  0.000 0.000 12  0 no 0.026 0 0 
       1 217 LYS QG  43 no   90.0   0.5  0.000  0.037 0.037 14  4 no 0.228 0 0 
       1 219 GLY QA  90 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 220 GLU QB  12 no   70.0  95.2  1.961  2.061 0.099 22  0 no 0.251 0 0 
       1 220 GLU QG  18 no   90.0  89.6  0.803  0.896 0.093 22  4 no 0.328 0 0 
       1 221 GLU QG  57 no   70.0  99.0  5.173  5.228 0.055 10  2 no 0.231 0 0 
       1 222 PHE QB  48 no  100.0  81.4  0.631  0.775 0.144 12  2 no 0.314 0 0 
       1 226 VAL QG   1 no  100.0  99.7 26.235 26.302 0.067 68  4 no 0.224 0 0 
       1 228 PHE QB  11 yes 100.0 100.0  0.130  0.130 0.000 24  6 no 0.000 0 0 
       1 229 PRO QB  89 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 229 PRO QD  27 no  100.0 100.0  0.056  0.056 0.000 18  4 no 0.228 0 0 
       1 229 PRO QG  41 no   70.0  43.1  0.032  0.074 0.042 14  0 no 0.191 0 0 
       1 230 GLU QG  21 no   10.0 100.0  0.200  0.200 0.000 20  6 no 0.008 0 0 
       1 231 GLU QB  88 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 232 TYR QB  39 no  100.0 100.0  0.000  0.000 0.000 16  4 no 0.010 0 0 
       1 236 ASN QB  66 no  100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 237 LEU QB  17 no  100.0  82.2  0.033  0.041 0.007 22  4 no 0.171 0 0 
       1 237 LEU QD  10 no  100.0   0.0  0.000  0.025 0.025 24  4 no 0.194 0 0 
       1 238 LYS QB  38 no  100.0  94.6  0.005  0.005 0.000 16  4 no 0.071 0 0 
       1 238 LYS QE  49 no  100.0   0.0  0.000  0.000 0.000 12  4 no 0.000 0 0 
       1 238 LYS QG   5 no  100.0  96.8  1.036  1.071 0.035 32  4 no 0.212 0 0 
       1 239 GLY QA  29 no   10.0  99.5  0.106  0.106 0.001 18  8 no 0.040 0 0 
       1 240 LYS QD  25 no  100.0  55.1  0.016  0.029 0.013 18  0 no 0.254 0 0 
       1 240 LYS QG  31 no  100.0  98.2  0.029  0.030 0.001 16  0 no 0.212 0 0 
       1 243 LYS QB  76 no  100.0 100.0  1.054  1.054 0.000  6  0 no 0.000 0 0 
       1 243 LYS QG  55 no   50.0 100.0  0.002  0.002 0.000 10  0 no 0.000 0 0 
       1 244 PHE QB  65 no  100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 246 ILE QG   9 no   80.0  48.6  0.057  0.117 0.060 26  8 no 0.218 0 0 
       1 247 ASN QB  64 no  100.0   0.0  0.000  0.007 0.007  8  0 no 0.077 0 0 
       1 248 LEU QD  63 no  100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 249 LYS QB  75 no   90.0  62.5  0.031  0.050 0.019  6  0 no 0.174 0 0 
       1 251 VAL QG   4 no  100.0  99.8 24.440 24.491 0.051 32  0 no 0.208 0 0 
       1 254 ARG QB  30 no  100.0   0.0  0.000  0.000 0.000 16  0 no 0.006 0 0 
       1 254 ARG QG  44 no  100.0   0.0  0.000  0.028 0.028 12  0 no 0.311 0 0 
       1 255 GLU QB  56 no  100.0 100.0  0.638  0.638 0.000 10  2 no 0.014 0 0 
       1 255 GLU QG  37 no   60.0  87.4  0.593  0.678 0.085 16  2 no 0.269 0 0 
       1 257 PRO QB  87 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 257 PRO QD  86 no    0.0   0.0  0.000  0.021 0.021  4  0 no 0.142 0 0 
       1 259 LEU QD  85 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.016 0 0 
       1 269 VAL QG  53 no   90.0   0.0  0.000  0.075 0.075 12  8 no 0.240 0 0 
       1 277 LEU QD  84 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 289 LEU QD  28 no  100.0  99.4  0.604  0.608 0.003 18  8 no 0.106 0 0 
       1 305 LEU QD  62 no    0.0   0.0  0.000  0.018 0.018  8  0 no 0.240 0 0 
       1 313 VAL QG  83 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 317 LEU QD  82 no  100.0   0.0  0.000  0.002 0.002  4  0 no 0.097 0 0 
       1 325 LEU QD  74 no  100.0 100.0  2.370  2.370 0.000  6  0 no 0.000 0 0 
       1 341 LEU QD  81 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 343 LEU QD  52 no  100.0   0.0  0.000  0.056 0.056 12  8 no 0.301 0 0 
       1 347 LEU QD  72 no  100.0   0.0  0.000  0.009 0.009  8  8 no 0.135 0 0 
       1 360 LEU QD  80 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 362 LEU QD  23 no  100.0   0.0  0.000  0.017 0.017 20 16 no 0.195 0 0 
       1 371 LEU QD  61 no  100.0   0.0  0.000  0.013 0.013  8  0 no 0.122 0 0 
       1 378 VAL QG  73 no  100.0 100.0  0.047  0.047 0.000  6  0 no 0.235 0 0 
       1 381 LEU QD  60 no  100.0   0.0  0.000  0.003 0.003  8  0 no 0.121 0 0 
       1 395 VAL QG  59 no  100.0   0.0  0.000  0.000 0.000  8  0 no 0.042 0 0 
       1 399 TYR QE  99 no   10.0 100.0  0.021  0.021 0.000  2  0 no 0.000 0 0 
       1 412 VAL QG  79 no  100.0   0.0  0.000  0.005 0.005  4  0 no 0.107 0 0 
       1 414 LEU QD  78 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 419 VAL QG  71 no  100.0   0.0  0.000  0.000 0.000  8  8 no 0.040 0 0 
       1 422 VAL QG  70 no  100.0   0.0  0.000  0.017 0.017  8  8 no 0.195 0 0 
       1 423 LEU QD  51 no  100.0   0.0  0.000  0.000 0.000 12  8 no 0.000 0 0 
       1 438 LEU QD  22 no  100.0   0.0  0.000  0.014 0.014 20  8 no 0.139 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 2, 2024 1:07:45 PM GMT (wattos1)