NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type subtype subsubtype
481500 1e10 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1e10


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        66
    _Stereo_assign_list.Swap_count           7
    _Stereo_assign_list.Swap_percentage      10.6
    _Stereo_assign_list.Deassign_count       15
    _Stereo_assign_list.Deassign_percentage  22.7
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   15.188
    _Stereo_assign_list.Total_e_high_states  60.781
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   3 VAL QG 20 no   95.0  95.6 2.751 2.879 0.128  9 0 yes 1.600  1  1 
       1   4 GLU QB 17 yes 100.0 100.0 1.648 1.648 0.000 10 0 no  0.018  0  0 
       1   5 TYR QB  6 yes 100.0 100.0 0.501 0.501 0.000 14 0 no  0.070  0  0 
       1   6 LEU QD  1 no   75.0  79.6 3.988 5.011 1.023 18 3 yes 1.728  7 18 
       1   7 ASN QB 19 yes  75.0  62.3 0.655 1.051 0.396  9 0 yes 1.083  3 10 
       1   7 ASN QD 60 no   15.0  97.8 0.005 0.005 0.000  3 0 no  0.020  0  0 
       1   8 TYR QB 44 no  100.0   0.0 0.000 0.000 0.000  6 0 no  0.000  0  0 
       1  11 LEU QD 24 no   70.0  42.8 3.254 7.604 4.350  8 3 yes 2.763 11 21 
       1  13 ASP QB 61 no   85.0  41.9 0.012 0.028 0.016  2 0 no  0.516  0  1 
       1  14 GLN QB 35 no   40.0  34.5 0.299 0.867 0.568  7 1 no  0.010  0  0 
       1  14 GLN QE 46 no  100.0   0.0 0.000 0.000 0.000  6 2 no  0.000  0  0 
       1  16 TRP QB  9 no   95.0   3.1 0.051 1.657 1.606 12 6 yes 2.364 11 12 
       1  17 ASP QB 23 no  100.0 100.0 0.438 0.438 0.000  8 0 no  0.000  0  0 
       1  19 ASP QB 54 no  100.0   0.0 0.000 0.000 0.000  4 0 no  0.000  0  0 
       1  22 ASP QB 34 no  100.0   0.0 0.000 0.000 0.000  7 0 no  0.000  0  0 
       1  23 LEU QB 43 no   70.0  59.6 0.310 0.520 0.210  6 0 yes 1.226  3  4 
       1  23 LEU QD  5 no   55.0  30.3 0.718 2.372 1.654 16 8 yes 2.090 16 22 
       1  24 PHE QB 33 no   20.0 100.0 0.004 0.004 0.000  7 0 no  0.000  0  0 
       1  26 LYS QB 59 no  100.0   0.0 0.000 0.000 0.000  3 0 no  0.000  0  0 
       1  29 ASP QB 32 no  100.0   0.0 0.000 0.000 0.000  7 0 no  0.000  0  0 
       1  32 LEU QB 22 no   90.0 100.0 0.219 0.219 0.000  8 0 no  0.000  0  0 
       1  32 LEU QD 45 no   60.0  44.1 0.180 0.408 0.228  6 2 yes 1.078  3 11 
       1  33 ASP QB 50 no  100.0   0.0 0.000 0.000 0.000  5 0 no  0.000  0  0 
       1  34 GLY QA 31 no  100.0 100.0 2.012 2.012 0.000  7 0 no  0.059  0  0 
       1  37 TYR QB 14 no  100.0  99.0 3.848 3.887 0.038 11 1 no  0.019  0  0 
       1  38 GLY QA 42 no  100.0 100.0 0.032 0.032 0.000  6 0 no  0.337  0  0 
       1  40 MET QB 12 no  100.0 100.0 2.104 2.104 0.000 11 0 no  0.024  0  0 
       1  40 MET QG 58 no   50.0  97.2 0.383 0.394 0.011  3 0 no  0.366  0  0 
       1  42 VAL QG  7 no   70.0  69.7 4.379 6.280 1.902 12 0 yes 2.359 11 18 
       1  45 GLY QA 57 no  100.0   0.0 0.000 0.000 0.000  3 0 no  0.000  0  0 
       1  46 GLU QB 41 no   60.0  78.8 0.128 0.163 0.034  6 0 no  0.609  0  2 
       1  47 TYR QB 49 no  100.0   0.0 0.000 0.000 0.000  5 0 no  0.000  0  0 
       1  48 ILE QG 56 no   70.0  82.6 0.221 0.268 0.047  3 0 no  0.559  0  1 
       1  55 GLN QB 18 yes 100.0 100.0 0.148 0.148 0.000  9 0 no  0.000  0  0 
       1  55 GLN QG 65 no  100.0   0.0 0.000 0.000 0.000  1 0 no  0.000  0  0 
       1  56 GLY QA 53 no  100.0   0.0 0.000 0.000 0.000  4 0 no  0.000  0  0 
       1  57 TYR QB  3 yes 100.0 100.0 3.187 3.188 0.001 17 0 no  0.124  0  0 
       1  58 ASP QB 48 no  100.0   0.0 0.000 0.000 0.000  5 0 no  0.000  0  0 
       1  75 VAL QG  2 no  100.0 100.0 4.754 4.754 0.000 17 0 no  0.067  0  0 
       1  76 LYS QB 11 no  100.0   0.0 0.000 0.000 0.000 11 0 no  0.000  0  0 
       1  77 GLU QB 30 no  100.0   0.0 0.000 0.000 0.000  7 0 no  0.000  0  0 
       1  78 GLY QA  8 no  100.0 100.0 0.052 0.052 0.000 12 2 no  0.419  0  0 
       1  80 ILE QG 40 no  100.0 100.0 0.292 0.292 0.000  6 0 no  0.005  0  0 
       1  81 ASP QB 39 yes  80.0  89.3 0.194 0.217 0.023  6 0 no  0.486  0  0 
       1  83 ASP QB 38 yes  85.0  88.3 0.261 0.296 0.035  6 0 no  0.682  0  1 
       1  92 GLU QB 52 no   35.0  45.5 0.010 0.021 0.012  4 0 no  0.482  0  0 
       1  93 VAL QG 21 no   35.0  62.6 0.745 1.190 0.445  8 0 yes 1.989  7 14 
       1  97 ASP QB 29 no   40.0  22.5 0.138 0.616 0.478  7 0 yes 1.285  8  8 
       1  98 VAL QG 16 no   60.0  36.4 0.553 1.520 0.967 10 0 yes 1.279  9 19 
       1 104 GLY QA 28 no   90.0  48.1 0.187 0.390 0.202  7 0 yes 1.455  2  3 
       1 105 SER QB 37 no   85.0  49.6 0.072 0.146 0.073  6 0 no  0.986  0  4 
       1 110 GLU QG 55 no  100.0   0.0 0.000 0.000 0.000  3 0 no  0.000  0  0 
       1 111 VAL QG  4 no  100.0  94.4 0.381 0.404 0.022 17 2 no  0.348  0  0 
       1 112 LYS QB 27 no  100.0 100.0 2.583 2.583 0.000  7 0 no  0.028  0  0 
       1 113 ILE QG 47 no   85.0  93.0 1.283 1.380 0.097  5 0 no  0.807  0  4 
       1 114 VAL QG 15 no   55.0  82.0 2.051 2.500 0.449 10 0 yes 1.825 22 22 
       1 116 ASN QB 13 no   75.0  67.2 0.021 0.031 0.010 11 1 no  0.604  0  1 
       1 116 ASN QD 66 no  100.0   0.0 0.000 0.000 0.000  1 1 no  0.000  0  0 
       1 118 LYS QD 64 no  100.0 100.0 0.060 0.060 0.000  1 0 yes 1.071  1  1 
       1 118 LYS QE 63 no  100.0   0.0 0.000 0.000 0.000  1 0 no  0.000  0  0 
       1 119 HIS QB 10 no   25.0  77.1 0.111 0.143 0.033 11 0 no  0.677  0  1 
       1 122 TYR QB 26 no  100.0   0.0 0.000 0.000 0.000  7 0 no  0.000  0  0 
       1 123 LEU QB 25 no   45.0 100.0 0.225 0.225 0.000  7 0 no  0.000  0  0 
       1 123 LEU QD 36 no   40.0  31.6 0.059 0.187 0.128  6 0 no  0.921  0  4 
       1 124 GLN QE 62 no   25.0 100.0 0.087 0.087 0.000  1 0 no  0.000  0  0 
       1 125 ASN QB 51 no  100.0   0.0 0.000 0.000 0.000  4 0 no  0.000  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 3, 2024 11:33:09 PM GMT (wattos1)