NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing in_recoord stage program type subtype subsubtype
383644 1k0s 4984 cing recoord 4-filtered-FRED Wattos check stereo assignment distance


data_1k0s


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        40
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   1.029
    _Stereo_assign_list.Total_e_high_states  105.273
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   4 LEU QD 30 no 100.0 100.0  0.000  0.000 0.000  3 1 no 0.018 0 0 
       1   8 LEU QD 20 no  95.0 100.0  1.800  1.800 0.000  5 1 no 0.059 0 0 
       1  13 VAL QG  3 no 100.0  99.2 12.246 12.345 0.099 27 1 no 0.217 0 0 
       1  14 LEU QD 29 no 100.0  99.3  0.584  0.588 0.004  3 1 no 0.083 0 0 
       1  15 SER QB 39 no  85.0 100.0  0.004  0.004 0.000  1 0 no 0.000 0 0 
       1  23 LEU QD  6 no 100.0  99.3 11.819 11.897 0.078 23 8 no 0.262 0 0 
       1  25 PHE QB 38 no 100.0   0.0  0.000  0.000 0.000  1 0 no 0.000 0 0 
       1  27 VAL QG 17 no 100.0 100.0  1.380  1.380 0.000  6 0 no 0.006 0 0 
       1  33 VAL QG 28 no 100.0 100.0  2.384  2.384 0.000  3 0 no 0.000 0 0 
       1  49 VAL QG 27 no 100.0 100.0  0.033  0.033 0.000  3 0 no 0.000 0 0 
       1  52 VAL QG  5 no 100.0  99.9  6.309  6.318 0.009 24 1 no 0.148 0 0 
       1  57 GLY QA 32 no 100.0   0.0  0.000  0.005 0.005  2 0 no 0.084 0 0 
       1  62 VAL QG 31 no 100.0 100.0  0.661  0.661 0.000  2 0 no 0.040 0 0 
       1  63 VAL QG 11 no 100.0  90.8  0.351  0.387 0.036 12 2 no 0.255 0 0 
       1  65 LEU QD  8 no 100.0  99.7  4.528  4.544 0.015 20 4 no 0.167 0 0 
       1  69 LEU QD  9 no 100.0  99.5  5.287  5.315 0.027 20 7 no 0.183 0 0 
       1  70 GLY QA 19 no 100.0 100.0  0.037  0.037 0.000  5 0 no 0.267 0 0 
       1  83 VAL QG 26 no 100.0 100.0  1.353  1.353 0.000  3 0 no 0.000 0 0 
       1  88 ASP QB 40 no   5.0 100.0  0.000  0.000 0.000  1 1 no 0.000 0 0 
       1  89 VAL QG 10 no 100.0  99.1 13.243 13.368 0.126 14 3 no 0.387 0 0 
       1  91 VAL QG  2 no 100.0  87.6  2.147  2.452 0.305 30 3 no 0.387 0 0 
       1  92 GLY QA 15 no 100.0  99.8  0.005  0.005 0.000  7 0 no 0.091 0 0 
       1  94 LEU QD 23 no 100.0 100.0  1.893  1.893 0.000  4 1 no 0.090 0 0 
       1  95 VAL QG  1 no 100.0  99.8 16.716 16.744 0.028 31 1 no 0.152 0 0 
       1  98 VAL QG  7 no 100.0  99.7  8.224  8.249 0.025 22 1 no 0.180 0 0 
       1  99 LEU QD 14 no 100.0 100.0  0.004  0.004 0.000  7 0 no 0.095 0 0 
       1 100 GLY QA 22 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1 101 VAL QG 18 no  40.0  63.2  0.007  0.011 0.004  5 0 no 0.129 0 0 
       1 102 LEU QD 13 no 100.0  98.3  1.502  1.528 0.026  8 1 no 0.176 0 0 
       1 106 GLU QG 37 no 100.0   0.0  0.000  0.000 0.000  1 0 no 0.000 0 0 
       1 108 GLN QG 36 no  60.0 100.0  0.326  0.326 0.000  1 0 no 0.036 0 0 
       1 109 LEU QD 21 no  65.0 100.0  0.612  0.612 0.000  4 0 no 0.028 0 0 
       1 111 LEU QD 35 no   5.0 100.0  0.000  0.000 0.000  1 0 no 0.000 0 0 
       1 114 VAL QG 25 no  80.0 100.0  2.195  2.195 0.001  3 0 no 0.084 0 0 
       1 124 GLY QA 24 no  80.0  99.7  0.152  0.153 0.000  3 0 no 0.063 0 0 
       1 125 LEU QB 34 no 100.0   0.0  0.000  0.000 0.000  1 0 no 0.000 0 0 
       1 125 LEU QD 12 no 100.0  99.0  3.624  3.661 0.036 10 1 no 0.278 0 0 
       1 126 VAL QG  4 no 100.0  93.1  2.657  2.854 0.197 26 3 no 0.400 0 0 
       1 136 LEU QD 16 no  95.0  99.4  0.753  0.758 0.005  7 1 no 0.114 0 0 
       1 147 VAL QG 33 no 100.0  99.8  1.406  1.408 0.002  1 0 no 0.080 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 31, 2024 11:57:03 PM GMT (wattos1)