NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type subtype subsubtype
380881 1iku cing 4-filtered-FRED Wattos check stereo assignment distance


data_1iku


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        62
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       16
    _Stereo_assign_list.Deassign_percentage  25.8
    _Stereo_assign_list.Model_count          22
    _Stereo_assign_list.Total_e_low_states   26.811
    _Stereo_assign_list.Total_e_high_states  97.674
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   8 LEU QD  4 no 100.0 100.0  1.926  1.926  0.000 33 0 no  0.000  0  0 
       1  13 LEU QD 11 no 100.0 100.0  1.609  1.609  0.000 30 6 no  0.000  0  0 
       1  16 LEU QB 52 no  86.4 100.0  0.216  0.216  0.000  7 1 no  0.000  0  0 
       1  16 LEU QD 56 no  77.3 100.0  0.309  0.309  0.000  6 2 no  0.000  0  0 
       1  18 LEU QD 22 no  45.5 100.0  0.020  0.020  0.000 15 2 no  0.000  0  0 
       1  22 PHE QB 25 no  95.5  76.1  0.119  0.156  0.037 14 3 no  0.455  0  0 
       1  26 GLU QB 57 no  59.1  47.6  0.036  0.077  0.040  5 0 no  0.365  0  0 
       1  27 LEU QD  7 no 100.0  99.3  5.053  5.090  0.037 33 3 no  0.455  0  0 
       1  30 TRP QB 28 no 100.0  99.8  2.288  2.292  0.004 13 0 no  0.097  0  0 
       1  34 PHE QB 23 no  95.5  16.5  0.021  0.126  0.105 14 0 no  0.439  0  0 
       1  35 LEU QB 35 no 100.0  99.4  4.035  4.057  0.022 11 3 no  0.247  0  0 
       1  35 LEU QD 12 no 100.0 100.0  1.869  1.869  0.000 26 3 no  0.000  0  0 
       1  37 GLU QB 50 no  81.8  66.1  1.833  2.775  0.942  7 0 yes 2.022  8 10 
       1  48 PHE QB 24 no   4.5 100.0  0.000  0.000  0.000 14 2 no  0.000  0  0 
       1  52 TYR QB 29 no 100.0   0.0  0.000  0.086  0.086 12 0 no  0.459  0  0 
       1  55 PHE QB 44 no  68.2  89.8  0.049  0.054  0.006  8 0 no  0.122  0  0 
       1  56 PHE QB 33 no 100.0 100.0  0.226  0.226  0.000 11 0 no  0.000  0  0 
       1  58 GLU QB 55 no  45.5  56.4  0.152  0.270  0.118  6 0 no  0.700  0  2 
       1  60 ASP QB 41 no  63.6  37.2  0.019  0.050  0.032  9 0 no  0.325  0  0 
       1  68 VAL QG  6 no 100.0 100.0  0.205  0.205  0.000 33 3 no  0.000  0  0 
       1  71 SER QB 39 no  81.8  55.2  0.037  0.068  0.030 10 1 no  0.373  0  0 
       1  73 ASP QB 61 no  59.1  31.9  0.019  0.059  0.040  4 0 no  0.361  0  0 
       1  75 ASN QB 62 no  45.5  18.0  0.010  0.054  0.044  2 0 no  0.362  0  0 
       1  80 LEU QD  3 no 100.0 100.0  3.106  3.106  0.000 34 4 no  0.000  0  0 
       1  82 PHE QB 17 no  68.2  80.6  0.454  0.563  0.109 18 0 yes 1.297  6 13 
       1  85 TYR QB 18 no  86.4  63.6  0.133  0.209  0.076 16 4 no  0.616  0  1 
       1  86 VAL QG  2 no 100.0 100.0  1.779  1.779  0.000 37 5 no  0.000  0  0 
       1  89 LEU QD 14 no  68.2 100.0  0.535  0.535  0.000 23 4 no  0.000  0  0 
       1 101 LEU QB 30 no 100.0   0.0  0.000  0.009  0.009 12 1 no  0.126  0  0 
       1 101 LEU QD  5 no 100.0 100.0  2.190  2.190  0.000 33 3 no  0.056  0  0 
       1 105 PHE QB 20 no 100.0 100.0  0.190  0.190  0.000 15 0 no  0.000  0  0 
       1 107 LEU QD  1 no 100.0  77.9  0.848  1.089  0.241 38 2 yes 1.156  1  7 
       1 108 TYR QB 19 no 100.0  94.6  1.374  1.452  0.078 15 0 no  0.357  0  0 
       1 109 ASP QB 37 no  77.3  36.6  0.093  0.254  0.161 10 0 no  0.726  0  7 
       1 110 VAL QG 32 no  59.1 100.0  0.154  0.154  0.000 12 2 no  0.007  0  0 
       1 111 ASP QB 47 no  40.9  19.0  0.065  0.345  0.279  8 2 yes 1.529  2  6 
       1 118 LYS QB 36 no  86.4  71.9  0.377  0.524  0.147 10 0 no  0.847  0  4 
       1 121 VAL QG 10 no 100.0 100.0  5.701  5.701  0.000 31 2 no  0.000  0  0 
       1 122 LEU QB 34 no  95.5  92.3  0.335  0.363  0.028 11 3 no  0.402  0  0 
       1 122 LEU QD  9 no 100.0 100.0  3.834  3.836  0.002 32 6 no  0.190  0  0 
       1 123 GLU QB 43 no 100.0  98.9  1.471  1.487  0.016  8 0 no  0.250  0  0 
       1 125 VAL QG 13 no 100.0  99.8  1.833  1.837  0.003 25 2 no  0.191  0  0 
       1 133 SER QB 54 no  27.3  64.4  0.004  0.006  0.002  6 0 no  0.134  0  0 
       1 140 LEU QB 48 no  40.9  14.5  0.386  2.671  2.285  8 3 yes 2.995 15 17 
       1 140 LEU QD 16 no 100.0  95.0  3.717  3.913  0.196 20 3 yes 1.152  1  5 
       1 145 ASN QB 53 no  54.5  23.8  0.626  2.631  2.005  6 0 yes 3.367  9 16 
       1 148 GLU QB 51 no 100.0  95.0  0.980  1.031  0.051  7 1 no  0.459  0  0 
       1 158 PHE QB 31 no  81.8  36.9  0.157  0.426  0.269 12 2 yes 1.561  2  4 
       1 161 LYS QB 49 no  72.7   6.8  0.066  0.970  0.903  7 0 yes 2.150  7 13 
       1 165 LYS QB 27 no  81.8  25.4  0.600  2.359  1.759 13 0 yes 1.750 12 44 
       1 166 LEU QD 15 no 100.0  52.8 11.625 22.037 10.412 21 4 yes 4.739 22 22 
       1 168 GLU QB 60 no  54.5  40.1  0.107  0.267  0.160  4 0 no  0.722  0  8 
       1 169 LYS QB 59 no  50.0  26.3  0.180  0.682  0.503  4 0 yes 1.014  1 19 
       1 173 GLU QB 46 no  86.4  50.9  0.809  1.588  0.779  8 1 yes 1.237  2  7 
       1 176 LEU QB 40 no  59.1  66.2  0.283  0.428  0.145 10 2 no  0.630  0  4 
       1 176 LEU QD 21 no  59.1   9.6  0.372  3.885  3.513 15 2 yes 2.864 25 44 
       1 178 ASN QB 42 no  63.6  52.8  0.045  0.085  0.040  8 0 no  0.361  0  0 
       1 180 GLU QB 45 no  95.5  92.2  0.527  0.571  0.044  8 1 no  0.695  0  1 
       1 182 LEU QD 38 no 100.0 100.0  0.679  0.679  0.000 10 1 no  0.000  0  0 
       1 184 LEU QB 26 no 100.0  79.7  2.568  3.223  0.655 14 4 yes 1.219  2 21 
       1 184 LEU QD  8 no 100.0  89.0  2.560  2.877  0.317 32 5 yes 1.477  2  7 
       1 188 GLU QB 58 no  72.7  37.3  0.048  0.128  0.080  4 0 no  0.550  0  1 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 18, 2024 10:47:11 PM GMT (wattos1)