NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
379245 1hs5 4934 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1hs5


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        37
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.043
    _Stereo_assign_list.Total_e_high_states  5.514
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  5 PHE QB 14 no 100.0   0.0 0.000 0.000 0.000 10  0 no 0.000 0 0 
       1  7 LEU QB  4 no  25.0 100.0 0.157 0.157 0.000 24  6 no 0.009 0 0 
       1  7 LEU QD  1 no  30.0 100.0 0.394 0.394 0.000 43 18 no 0.000 0 0 
       1  8 GLN QB 36 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 10 ARG QB 33 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 10 ARG QG 26 no 100.0   0.0 0.000 0.000 0.000  5  0 no 0.063 0 0 
       1 11 GLY QA 13 no 100.0   0.0 0.000 0.000 0.000 10  0 no 0.000 0 0 
       1 12 ARG QG  2 no  95.0 100.0 0.909 0.909 0.000 36 16 no 0.007 0 0 
       1 14 ARG QB 37 no 100.0   0.0 0.000 0.000 0.000  1  0 no 0.000 0 0 
       1 16 GLU QG  6 no 100.0   0.0 0.000 0.000 0.000 20 16 no 0.004 0 0 
       1 17 GLN QB  8 no 100.0   0.0 0.000 0.000 0.000 16  2 no 0.000 0 0 
       1 17 GLN QG 23 no 100.0   0.0 0.000 0.000 0.000  6  2 no 0.064 0 0 
       1 18 PHE QB  5 no 100.0   0.0 0.000 0.000 0.000 22  2 no 0.000 0 0 
       1 19 ARG QB 12 no 100.0   0.0 0.000 0.000 0.000 10  0 no 0.024 0 0 
       1 19 ARG QD 11 no 100.0   0.0 0.000 0.037 0.037 11  1 no 0.605 0 2 
       1 19 ARG QG 22 no 100.0   0.0 0.000 0.000 0.000  6  1 no 0.000 0 0 
       1 21 ARG QG  9 no   5.0   0.0 0.000 0.002 0.002 12  0 no 0.077 0 0 
       1 22 ASN QB 21 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 25 LEU QB 18 no 100.0   0.0 0.000 0.000 0.000  7  0 no 0.000 0 0 
       1 25 LEU QD  3 no   5.0 100.0 0.000 0.000 0.000 24  0 no 0.000 0 0 
       1 26 GLU QG 35 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 29 ASP QB  7 no  10.0  68.8 0.000 0.001 0.000 16  0 no 0.031 0 0 
       1 31 GLN QG 20 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       2  5 PHE QB 32 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       2  7 LEU QB 17 no  25.0 100.0 0.157 0.157 0.000  8  6 no 0.009 0 0 
       2  7 LEU QD 10 no 100.0   0.0 0.000 0.000 0.000 12  2 no 0.000 0 0 
       2  8 GLN QB 31 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       2  8 GLN QE 30 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       2 12 ARG QB 29 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       2 12 ARG QD 19 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       2 12 ARG QG 28 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.005 0 0 
       2 18 PHE QB 25 no 100.0 100.0 3.785 3.787 0.002  6  4 no 0.058 0 0 
       2 19 ARG QD 34 no 100.0   0.0 0.000 0.000 0.000  4  4 no 0.000 0 0 
       2 22 ASN QB 24 no 100.0   0.0 0.000 0.000 0.000  6  4 no 0.000 0 0 
       2 22 ASN QD 15 no 100.0   0.0 0.000 0.000 0.000 10  6 no 0.000 0 0 
       2 25 LEU QD 16 no  35.0 100.0 0.069 0.069 0.000  8  0 no 0.000 0 0 
       2 28 LYS QG 27 no  10.0   0.0 0.000 0.002 0.002  4  0 no 0.056 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Wednesday, May 15, 2024 5:20:41 PM GMT (wattos1)