NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type subtype subsubtype
376819 1ftt cing 4-filtered-FRED Wattos check stereo assignment distance


data_1ftt


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        79
    _Stereo_assign_list.Swap_count           8
    _Stereo_assign_list.Swap_percentage      10.1
    _Stereo_assign_list.Deassign_count       23
    _Stereo_assign_list.Deassign_percentage  29.1
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   36.381
    _Stereo_assign_list.Total_e_high_states  71.844
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  4 LYS QB 79 no   30.0   5.0 0.017 0.332 0.316  2  0 yes 1.163  3  5 
       1  5 ARG QB 78 no   55.0  67.5 0.249 0.369 0.120  2  0 no  0.759  0  4 
       1  6 ARG QB 73 no   55.0  17.0 0.146 0.856 0.710  3  0 yes 1.094  5 21 
       1  7 VAL QG 62 no  100.0   0.0 0.000 0.000 0.000  5  0 no  0.000  0  0 
       1  9 PHE QB 32 no   95.0  86.6 0.868 1.002 0.134 12  0 no  0.947  0  1 
       1 10 SER QB 20 no  100.0  93.0 1.488 1.601 0.113 14  0 no  0.415  0  0 
       1 11 GLN QB 31 no  100.0  68.1 0.159 0.234 0.075 12  0 no  0.285  0  0 
       1 11 GLN QE 72 yes 100.0  96.9 0.469 0.484 0.015  4  4 no  0.000  0  0 
       1 11 GLN QG 34 no   90.0  25.3 0.274 1.082 0.808 12  4 yes 1.103  3  6 
       1 13 GLN QB 17 no  100.0  61.1 0.407 0.667 0.260 15  0 no  0.504  0  1 
       1 13 GLN QE 51 no   90.0  99.6 0.672 0.674 0.003  8  8 no  0.143  0  0 
       1 13 GLN QG 59 no   65.0  40.3 0.123 0.306 0.182  6  0 no  0.647  0  3 
       1 14 VAL QG 35 no  100.0 100.0 1.312 1.312 0.000 11  0 no  0.000  0  0 
       1 15 TYR QB 30 no  100.0  99.7 0.991 0.994 0.003 12  0 no  0.097  0  0 
       1 16 GLU QB 14 no   90.0  69.8 0.321 0.460 0.139 16  0 no  0.572  0  1 
       1 16 GLU QG 38 no   75.0  13.6 0.110 0.812 0.701 10  0 yes 1.214  1 18 
       1 17 LEU QB  2 no  100.0  91.1 1.906 2.092 0.186 26  0 no  0.436  0  0 
       1 17 LEU QD  9 yes 100.0  94.9 0.757 0.797 0.040 17  4 no  0.703  0  1 
       1 18 GLU QB  6 no  100.0  90.5 0.552 0.610 0.058 18  0 no  0.274  0  0 
       1 18 GLU QG 29 no   25.0  14.0 0.112 0.798 0.686 12  0 no  0.916  0 14 
       1 19 ARG QB  4 no  100.0  74.2 1.309 1.764 0.455 20  4 no  0.784  0 11 
       1 19 ARG QD 15 no   55.0  14.2 0.170 1.194 1.024 16 10 yes 1.198  4 33 
       1 19 ARG QG 44 no   45.0   2.1 0.017 0.786 0.770 10  6 yes 0.942  0 59 
       1 20 ARG QB  1 no  100.0  79.0 1.968 2.491 0.524 27  8 yes 0.730  0 17 
       1 20 ARG QD 10 no   65.0  14.9 0.238 1.598 1.360 17  8 yes 1.265  5 47 
       1 21 PHE QB 69 no  100.0   0.0 0.000 0.000 0.000  4  0 no  0.000  0  0 
       1 22 LYS QB 68 no  100.0   0.0 0.000 0.013 0.013  4  0 no  0.308  0  0 
       1 22 LYS QD 77 no  100.0   0.0 0.000 0.000 0.000  2  0 no  0.000  0  0 
       1 22 LYS QG 76 no  100.0   0.0 0.000 0.240 0.240  2  0 no  0.884  0  9 
       1 23 GLN QB 58 no  100.0   0.0 0.000 0.182 0.182  6  0 no  0.618  0  6 
       1 23 GLN QE 71 yes 100.0 100.0 1.226 1.227 0.000  4  4 no  0.337  0  0 
       1 23 GLN QG 43 no   65.0   8.3 0.235 2.844 2.609 10  4 yes 1.371 12 24 
       1 24 GLN QB 21 no   65.0   9.8 0.040 0.409 0.369 14  2 no  0.916  0  9 
       1 24 GLN QE 70 no   50.0  24.1 0.239 0.990 0.751  4  2 yes 1.482  8 14 
       1 25 LYS QB 42 no   60.0  26.8 0.233 0.872 0.638 10  4 yes 1.358  2  5 
       1 25 LYS QD  5 no   60.0  10.2 0.501 4.920 4.419 20 10 yes 2.764 22 74 
       1 25 LYS QE 61 no   60.0   8.6 0.019 0.225 0.205  6  6 yes 0.826  0 24 
       1 26 TYR QB 28 no  100.0  91.9 0.708 0.770 0.062 12  0 no  0.581  0  2 
       1 27 LEU QB 16 no  100.0  98.0 1.996 2.037 0.040 15  0 no  0.413  0  0 
       1 27 LEU QD 18 no   25.0   4.3 0.007 0.171 0.164 15  4 no  0.823  0  5 
       1 28 SER QB 27 no  100.0  99.1 1.279 1.291 0.012 12  0 no  0.203  0  0 
       1 30 PRO QB 54 no  100.0  61.7 0.185 0.300 0.115  7  0 no  0.381  0  0 
       1 30 PRO QD 49 no  100.0  94.4 1.753 1.858 0.105  8  0 no  0.574  0  1 
       1 30 PRO QG 67 yes 100.0  97.5 3.138 3.219 0.081  4  0 no  0.279  0  0 
       1 31 GLU QB 19 no   60.0  20.7 0.063 0.302 0.240 14  0 no  0.649  0  4 
       1 32 ARG QB 36 no   60.0  11.6 0.053 0.457 0.404 11  2 no  0.823  0  7 
       1 32 ARG QG 57 no   80.0   6.9 0.056 0.811 0.755  6  0 yes 1.145  1 20 
       1 35 LEU QB 24 no   65.0  14.4 0.033 0.230 0.197 13  1 no  0.625  0  7 
       1 35 LEU QD 41 no   35.0  95.4 0.090 0.094 0.004 10  4 no  0.293  0  0 
       1 38 MET QB 53 no   75.0  26.5 0.146 0.552 0.406  7  0 no  0.825  0 10 
       1 39 ILE QG 52 no  100.0  99.9 0.319 0.319 0.000  7  0 no  0.076  0  0 
       1 40 HIS QB 40 yes 100.0  99.4 0.444 0.446 0.003 10  4 no  0.143  0  0 
       1 41 LEU QB 33 no  100.0  88.3 0.963 1.090 0.128 12  4 no  0.524  0  1 
       1 41 LEU QD  3 no   65.0   8.7 0.266 3.047 2.781 25 13 yes 3.231 17 29 
       1 43 PRO QG 66 yes 100.0  79.6 0.445 0.559 0.114  4  0 no  0.435  0  0 
       1 45 GLN QB  7 no   45.0  11.9 0.123 1.026 0.904 18  4 yes 1.244  7 19 
       1 45 GLN QE 46 no   30.0   7.5 0.113 1.507 1.394  9  9 yes 1.083  1 17 
       1 45 GLN QG 23 no   50.0  18.9 0.266 1.409 1.143 14 10 yes 1.313 10 34 
       1 47 LYS QB 50 yes 100.0  81.6 0.448 0.549 0.101  8  2 no  0.401  0  0 
       1 47 LYS QE 60 no   65.0  23.7 0.136 0.574 0.438  6  2 no  0.904  0  9 
       1 47 LYS QG 48 no   40.0   0.1 0.000 0.111 0.111  8  0 no  0.450  0  0 
       1 48 ILE QG 37 no   75.0   4.7 0.038 0.798 0.760 10  0 yes 0.825  0 20 
       1 49 TRP QB  8 no  100.0  98.8 1.858 1.880 0.022 17  1 no  0.496  0  0 
       1 50 PHE QB 26 no  100.0  84.0 0.411 0.489 0.078 12  0 no  0.355  0  0 
       1 51 GLN QB 13 no  100.0  56.1 0.262 0.466 0.205 16  0 no  0.408  0  0 
       1 51 GLN QG 65 no    0.0   0.0 0.000 0.074 0.074  4  0 no  0.323  0  0 
       1 52 ASN QB 22 no  100.0  67.5 0.260 0.385 0.125 14  4 no  0.379  0  0 
       1 52 ASN QD 39 no   95.0  52.4 0.366 0.698 0.333 10  4 yes 1.741  1  5 
       1 53 HIS QB 45 yes 100.0  96.2 0.692 0.719 0.027  9  0 no  0.421  0  0 
       1 54 ARG QB 75 no   45.0   8.8 0.005 0.054 0.050  2  0 no  0.497  0  0 
       1 55 TYR QB 12 no  100.0  72.0 0.340 0.473 0.132 16  0 no  0.446  0  0 
       1 56 LYS QB 11 no  100.0  33.4 0.159 0.476 0.317 16  0 no  0.598  0  4 
       1 57 MET QB 47 no   60.0   6.5 0.015 0.231 0.217  8  0 no  0.599  0  2 
       1 57 MET QG 56 no   70.0   1.0 0.004 0.425 0.421  6  0 yes 1.669  3  6 
       1 58 LYS QB 64 no   40.0  17.7 0.098 0.550 0.453  4  0 yes 1.518  1 12 
       1 59 ARG QB 55 no   95.0  56.0 0.241 0.431 0.189  6  0 no  0.915  0  1 
       1 60 GLN QB 63 no   55.0   6.4 0.342 5.332 4.990  4  0 yes 3.685 22 32 
       1 63 ASP QB 25 no   95.0  57.5 0.184 0.320 0.136 12  0 no  0.463  0  0 
       1 64 LYS QB 74 no   65.0  41.3 0.032 0.078 0.046  2  0 no  0.599  0  2 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Monday, May 6, 2024 4:07:32 AM GMT (wattos1)