NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | bmrb_id | cing | in_dress | stage | program | type | subtype | subsubtype |
372014 | 1cz4 | 4376 | cing | dress | 4-filtered-FRED | Wattos | check | completeness | distance |
data_1cz4 save_NOE_Completeness _NOE_completeness_stats.Sf_category NOE_completeness_statistics _NOE_completeness_stats.Model_count 1 _NOE_completeness_stats.Residue_count 185 _NOE_completeness_stats.Total_atom_count 2961 _NOE_completeness_stats.Observable_atom_definition ob_standard _NOE_completeness_stats.Observable_atom_count 1033 _NOE_completeness_stats.Use_intra_residue_restraints no _NOE_completeness_stats.Redundancy_threshold_pct 5.0 _NOE_completeness_stats.Distance_averaging_power 1.00 _NOE_completeness_stats.Completeness_cutoff 4.00 _NOE_completeness_stats.Completeness_cumulative_pct 27.4 _NOE_completeness_stats.Constraint_unexpanded_count 1880 _NOE_completeness_stats.Constraint_count 1881 _NOE_completeness_stats.Constraint_exp_unfiltered_count 3197 _NOE_completeness_stats.Constraint_exceptional_count 0 _NOE_completeness_stats.Constraint_nonobservable_count 107 _NOE_completeness_stats.Constraint_intraresidue_count 418 _NOE_completeness_stats.Constraint_surplus_count 7 _NOE_completeness_stats.Constraint_observed_count 1349 _NOE_completeness_stats.Constraint_expected_count 3190 _NOE_completeness_stats.Constraint_matched_count 874 _NOE_completeness_stats.Constraint_unmatched_count 475 _NOE_completeness_stats.Constraint_exp_nonobs_count 2316 _NOE_completeness_stats.Details ; A detailed methodology description is available at: http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html Please note that the contributions in ambiguous restraints are considered separate 'restraints' for the sets defined below. The cut off for all statistics except those in the by-shell table is given below by the above tag: _NOE_completeness_stats.Completeness_cutoff Description of the tags in this list: * 1 * Administrative tag * 2 * Administrative tag * 3 * Administrative tag * 4 * Number of models * 5 * Number of residues * 6 * Number of atoms * 7 * Standard set name of observable atom definitions see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999). * 8 * Observable atom(group)s * 9 * Include intra residue restraints * 10 * Surplus threshold for determining redundant restraints * 11 * Power for averaging the distance over models * 12 * Up to what distance are NOEs expected * 13 * Cumulative completeness percentage * 14 * Number of unexpanded restraints in restraint list. * 15 * Number of restraints in restraint list. Set U * 16 * Expected restraints based on criteria in list. Set V Set V differs from set B only if intra residue restraints are analyzed. * 17 * Exceptional restraints, i.e. with an unknown atom.Set E * 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O Even though restraints with these atom types might have been observed they are excluded from the analysis. * 19 * Intra-residue restraints if not to be analyzed. Set I * 20 * Surplus like double restraints. Set S * 21 * Observed restraints. Set A = U - (E u O u I u S) * 22 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 23 * Observed restraints matched to the expected. Set M = A n B * 24 * Observed restraints that were not expected. Set C = A - M * 25 * Expected restraints that were not observed. Set D = B - M * 26 * This tag Description of the tags in the class table: * 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts. Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular. * 2 * Observed restraints. Set A = U - (E u O u I u S) * 3 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 4 * Observed restraints matched to the expected. Set M = A n B * 5 * Completeness percentage * 6 * Standard deviation from the average over the classes. * 7 * Extra information * 8 * Administrative tag * 9 * Administrative tag Description of the tags in the shell table. The first row shows the lower limit of the shells requested and The last row shows the total number of restraints over the shells. * 1 * Description of the content of the row: edges, shell, or sums. The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others. * 2 * Lower limit of shell of expected restraints. * 3 * Upper limit of shell of expected restraints. * 4 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 5 * Observed restraints matched to the expected. Set M = A n B * 6 * Matched restraints with experimental distance in shell 1 * 7 * Matched restraints with experimental distance in shell 2 * 8 * Matched restraints with experimental distance in shell 3 * 9 * Matched restraints with experimental distance in shell 4 * 10 * Matched restraints with experimental distance in shell 5 * 11 * Matched restraints with experimental distance in shell 6 * 12 * Matched restraints with experimental distance in shell 7 * 13 * Matched restraints with experimental distance in shell 8 * 14 * Matched restraints with experimental distance in shell 9 * 15 * Matched restraints overflowing the last shell * 16 * Completeness percentage for this shell * 17 * Completeness percentage up to upper limit of this shell * 18 * Administrative tag * 19 * Administrative tag Description of the tags in the residue table: * 1 * Chain identifier * 2 * Residue number * 3 * Residue name * 4 * Observable atom(group)s for this residue. * 5 * Observed restraints. Set A = U - (E u O u I u S) * 6 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 7 * Observed restraints matched to the expected. Set M = A n B * 8 * Completeness percentage * 9 * Standard deviation from the average over the residues. * 10 * Extra information * 11 * Administrative tag * 12 * Administrative tag ; loop_ _NOE_completeness_class.Type _NOE_completeness_class.Constraint_observed_count _NOE_completeness_class.Constraint_expected_count _NOE_completeness_class.Constraint_matched_count _NOE_completeness_class.Completeness_cumulative_pct _NOE_completeness_class.Std_dev _NOE_completeness_class.Details intraresidue 0 0 0 . . "no intras" sequential 640 907 442 48.7 1.0 >sigma medium-range 212 565 117 20.7 -0.4 . long-range 497 1718 315 18.3 -0.6 . intermolecular 0 0 0 . . "no multimer" stop_ loop_ _NOE_completeness_shell.Type _NOE_completeness_shell.Shell_start _NOE_completeness_shell.Shell_end _NOE_completeness_shell.Constraint_expected_count _NOE_completeness_shell.Constraint_matched_count _NOE_completeness_shell.Matched_shell_1 _NOE_completeness_shell.Matched_shell_2 _NOE_completeness_shell.Matched_shell_3 _NOE_completeness_shell.Matched_shell_4 _NOE_completeness_shell.Matched_shell_5 _NOE_completeness_shell.Matched_shell_6 _NOE_completeness_shell.Matched_shell_7 _NOE_completeness_shell.Matched_shell_8 _NOE_completeness_shell.Matched_shell_9 _NOE_completeness_shell.Matched_shell_overflow _NOE_completeness_shell.Completeness_shell_pct _NOE_completeness_shell.Completeness_cumulative_pct edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . . shell 0.00 2.00 144 38 0 7 2 1 11 9 0 8 . 0 26.4 26.4 shell 2.00 2.50 392 172 0 77 34 7 27 18 3 6 . 0 43.9 39.2 shell 2.50 3.00 542 216 0 41 40 10 63 31 5 25 . 1 39.9 39.5 shell 3.00 3.50 838 217 0 0 45 5 81 41 12 25 . 8 25.9 33.6 shell 3.50 4.00 1274 231 0 0 0 0 95 53 30 44 . 9 18.1 27.4 shell 4.00 4.50 2062 261 0 0 0 0 35 64 57 49 . 56 12.7 21.6 shell 4.50 5.00 2677 159 0 0 0 0 0 7 47 64 . 41 5.9 16.3 shell 5.00 5.50 3143 52 0 0 0 0 0 0 24 26 . 2 1.7 12.2 shell 5.50 6.00 3671 3 0 0 0 0 0 0 0 1 . 2 0.1 9.2 shell 6.00 6.50 4151 0 0 0 0 0 0 0 0 0 . 0 0.0 7.1 shell 6.50 7.00 4476 0 0 0 0 0 0 0 0 0 . 0 0.0 5.8 shell 7.00 7.50 4977 0 0 0 0 0 0 0 0 0 . 0 0.0 4.8 shell 7.50 8.00 5466 0 0 0 0 0 0 0 0 0 . 0 0.0 4.0 shell 8.00 8.50 5982 0 0 0 0 0 0 0 0 0 . 0 0.0 3.4 shell 8.50 9.00 6350 0 0 0 0 0 0 0 0 0 . 0 0.0 2.9 sums . . 46145 1349 0 125 121 23 312 223 178 248 . 119 . . stop_ loop_ _NOE_completeness_comp.Entity_assembly_ID _NOE_completeness_comp.Comp_index_ID _NOE_completeness_comp.Comp_ID _NOE_completeness_comp.Obs_atom_count _NOE_completeness_comp.Constraint_observed_count _NOE_completeness_comp.Constraint_expected_count _NOE_completeness_comp.Constraint_matched_count _NOE_completeness_comp.Completeness_cumulative_pct _NOE_completeness_comp.Std_dev _NOE_completeness_comp.Details 1 1 MET 6 0 5 0 0.0 -2.0 >sigma 1 2 GLU 5 0 16 0 0.0 -2.0 >sigma 1 3 SER 4 0 7 0 0.0 -2.0 >sigma 1 4 ASN 6 0 18 0 0.0 -2.0 >sigma 1 5 ASN 6 2 17 2 11.8 -1.2 >sigma 1 6 GLY 3 17 29 12 41.4 0.8 . 1 7 ILE 6 20 46 13 28.3 -0.1 . 1 8 ILE 6 16 35 11 31.4 0.2 . 1 9 LEU 7 21 61 10 16.4 -0.9 . 1 10 ARG 7 20 33 8 24.2 -0.3 . 1 11 VAL 5 21 65 13 20.0 -0.6 . 1 12 ALA 3 16 40 14 35.0 0.4 . 1 13 GLU 5 8 29 5 17.2 -0.8 . 1 14 ALA 3 1 12 0 0.0 -2.0 >sigma 1 15 ASN 6 0 6 0 0.0 -2.0 >sigma 1 16 SER 4 0 10 0 0.0 -2.0 >sigma 1 17 THR 4 3 11 3 27.3 -0.1 . 1 18 ASP 4 5 11 4 36.4 0.5 . 1 19 PRO 5 4 10 3 30.0 0.1 . 1 20 GLY 3 9 17 7 41.2 0.8 . 1 21 MET 6 8 50 6 12.0 -1.2 >sigma 1 22 SER 4 8 23 5 21.7 -0.5 . 1 23 ARG 7 5 38 4 10.5 -1.3 >sigma 1 24 VAL 5 15 53 12 22.6 -0.4 . 1 25 ARG 7 19 69 12 17.4 -0.8 . 1 26 LEU 7 22 63 15 23.8 -0.4 . 1 27 ASP 4 21 35 13 37.1 0.5 . 1 28 GLU 5 13 25 10 40.0 0.7 . 1 29 SER 4 12 18 10 55.6 1.8 >sigma 1 30 SER 4 16 31 12 38.7 0.7 . 1 31 ARG 7 17 52 11 21.2 -0.6 . 1 32 ARG 7 12 23 9 39.1 0.7 . 1 33 LEU 7 14 40 11 27.5 -0.1 . 1 34 LEU 7 19 44 10 22.7 -0.4 . 1 35 ASP 4 9 20 5 25.0 -0.3 . 1 36 ALA 3 16 37 11 29.7 0.0 . 1 37 GLU 5 12 21 7 33.3 0.3 . 1 38 ILE 6 11 29 8 27.6 -0.1 . 1 39 GLY 3 10 13 6 46.2 1.2 >sigma 1 40 ASP 4 20 28 13 46.4 1.2 >sigma 1 41 VAL 5 23 45 14 31.1 0.1 . 1 42 VAL 5 21 52 13 25.0 -0.3 . 1 43 GLU 5 24 48 19 39.6 0.7 . 1 44 ILE 6 25 62 16 25.8 -0.2 . 1 45 GLU 5 24 28 17 60.7 2.2 >sigma 1 46 LYS 7 26 75 16 21.3 -0.5 . 1 47 VAL 5 16 48 15 31.3 0.1 . 1 48 ARG 7 17 39 13 33.3 0.3 . 1 49 LYS 7 17 38 9 23.7 -0.4 . 1 50 THR 4 25 45 15 33.3 0.3 . 1 51 VAL 5 36 61 26 42.6 0.9 . 1 52 GLY 3 16 25 11 44.0 1.0 >sigma 1 53 ARG 7 15 44 10 22.7 -0.4 . 1 54 VAL 5 17 56 10 17.9 -0.8 . 1 55 TYR 6 16 45 10 22.2 -0.5 . 1 56 ARG 7 8 18 5 27.8 -0.1 . 1 57 ALA 3 15 33 10 30.3 0.1 . 1 58 ARG 7 7 25 5 20.0 -0.6 . 1 59 PRO 5 6 38 3 7.9 -1.5 >sigma 1 60 GLU 5 9 16 5 31.3 0.1 . 1 61 ASP 4 8 17 6 35.3 0.4 . 1 62 GLU 5 15 31 11 35.5 0.4 . 1 63 ASN 6 14 57 11 19.3 -0.7 . 1 64 LYS 7 13 21 7 33.3 0.3 . 1 65 GLY 3 14 16 8 50.0 1.4 >sigma 1 66 ILE 6 19 52 12 23.1 -0.4 . 1 67 VAL 5 20 58 10 17.2 -0.8 . 1 68 ARG 7 11 60 7 11.7 -1.2 >sigma 1 69 ILE 6 15 60 10 16.7 -0.9 . 1 70 ASP 4 13 28 9 32.1 0.2 . 1 71 SER 4 8 15 6 40.0 0.7 . 1 72 VAL 5 14 36 11 30.6 0.1 . 1 73 MET 6 21 65 17 26.2 -0.2 . 1 74 ARG 7 15 52 10 19.2 -0.7 . 1 75 ASN 6 15 25 10 40.0 0.7 . 1 76 ASN 6 15 38 11 28.9 -0.0 . 1 77 CYS 4 24 36 19 52.8 1.6 >sigma 1 78 GLY 3 13 16 9 56.3 1.9 >sigma 1 79 ALA 3 19 33 9 27.3 -0.1 . 1 80 SER 4 13 13 8 61.5 2.2 >sigma 1 81 ILE 6 21 33 11 33.3 0.3 . 1 82 GLY 3 17 22 9 40.9 0.8 . 1 83 ASP 4 15 28 9 32.1 0.2 . 1 84 LYS 7 8 24 5 20.8 -0.6 . 1 85 VAL 5 18 63 12 19.0 -0.7 . 1 86 LYS 7 22 51 15 29.4 0.0 . 1 87 VAL 5 20 53 14 26.4 -0.2 . 1 88 ARG 7 23 50 16 32.0 0.2 . 1 89 LYS 7 22 57 14 24.6 -0.3 . 1 90 VAL 5 17 47 13 27.7 -0.1 . 1 91 ARG 7 14 19 9 47.4 1.2 >sigma 1 92 THR 4 19 33 13 39.4 0.7 . 1 93 GLU 5 14 26 8 30.8 0.1 . 1 94 ILE 6 11 22 7 31.8 0.2 . 1 95 ALA 3 19 40 10 25.0 -0.3 . 1 96 LYS 7 15 44 11 25.0 -0.3 . 1 97 LYS 7 20 60 16 26.7 -0.2 . 1 98 VAL 5 21 51 10 19.6 -0.7 . 1 99 THR 4 18 42 12 28.6 -0.0 . 1 100 LEU 7 21 69 12 17.4 -0.8 . 1 101 ALA 3 22 28 12 42.9 0.9 . 1 102 PRO 5 9 40 7 17.5 -0.8 . 1 103 ILE 6 17 56 10 17.9 -0.8 . 1 104 ILE 6 22 65 15 23.1 -0.4 . 1 105 ARG 7 14 35 8 22.9 -0.4 . 1 106 LYS 7 10 16 7 43.8 1.0 . 1 107 ASP 4 13 23 7 30.4 0.1 . 1 108 GLN 7 14 40 7 17.5 -0.8 . 1 109 ARG 7 6 28 5 17.9 -0.8 . 1 110 LEU 7 11 48 8 16.7 -0.9 . 1 111 LYS 7 8 33 4 12.1 -1.2 >sigma 1 112 PHE 7 18 26 10 38.5 0.6 . 1 113 GLY 3 16 17 12 70.6 2.8 >sigma 1 114 GLU 5 12 8 6 75.0 3.1 >sigma 1 115 GLY 3 14 12 9 75.0 3.1 >sigma 1 116 ILE 6 28 61 21 34.4 0.4 . 1 117 GLU 5 17 36 14 38.9 0.7 . 1 118 GLU 5 15 19 10 52.6 1.6 >sigma 1 119 TYR 6 19 30 11 36.7 0.5 . 1 120 VAL 5 27 57 20 35.1 0.4 . 1 121 GLN 7 24 55 18 32.7 0.2 . 1 122 ARG 7 26 26 16 61.5 2.2 >sigma 1 123 ALA 3 17 23 11 47.8 1.3 >sigma 1 124 LEU 7 14 45 11 24.4 -0.3 . 1 125 ILE 6 30 53 17 32.1 0.2 . 1 126 ARG 7 14 33 10 30.3 0.1 . 1 127 ARG 7 9 43 7 16.3 -0.9 . 1 128 PRO 5 12 30 8 26.7 -0.2 . 1 129 MET 6 15 46 9 19.6 -0.7 . 1 130 LEU 7 33 55 21 38.2 0.6 . 1 131 GLU 5 25 43 13 30.2 0.1 . 1 132 GLN 7 16 33 11 33.3 0.3 . 1 133 ASP 4 19 31 11 35.5 0.4 . 1 134 ASN 6 17 34 9 26.5 -0.2 . 1 135 ILE 6 18 40 9 22.5 -0.5 . 1 136 SER 4 10 16 6 37.5 0.6 . 1 137 VAL 5 6 29 3 10.3 -1.3 >sigma 1 138 PRO 5 5 15 3 20.0 -0.6 . 1 139 GLY 3 5 7 5 71.4 2.9 >sigma 1 140 LEU 7 9 37 6 16.2 -0.9 . 1 141 THR 4 8 20 6 30.0 0.1 . 1 142 LEU 7 17 43 14 32.6 0.2 . 1 143 ALA 3 8 17 7 41.2 0.8 . 1 144 GLY 3 6 7 5 71.4 2.9 >sigma 1 145 GLN 7 23 48 17 35.4 0.4 . 1 146 THR 4 9 14 5 35.7 0.4 . 1 147 GLY 3 5 14 2 14.3 -1.0 >sigma 1 148 LEU 7 7 45 3 6.7 -1.5 >sigma 1 149 LEU 7 17 45 10 22.2 -0.5 . 1 150 PHE 7 21 49 9 18.4 -0.7 . 1 151 LYS 7 20 46 12 26.1 -0.2 . 1 152 VAL 5 27 50 16 32.0 0.2 . 1 153 VAL 5 17 38 9 23.7 -0.4 . 1 154 LYS 7 21 38 14 36.8 0.5 . 1 155 THR 4 18 45 12 26.7 -0.2 . 1 156 LEU 7 17 51 12 23.5 -0.4 . 1 157 PRO 5 11 43 7 16.3 -0.9 . 1 158 SER 4 12 16 7 43.8 1.0 . 1 159 LYS 7 10 32 5 15.6 -0.9 . 1 160 VAL 5 11 31 7 22.6 -0.5 . 1 161 PRO 5 19 49 11 22.4 -0.5 . 1 162 VAL 5 27 55 12 21.8 -0.5 . 1 163 GLU 5 18 33 12 36.4 0.5 . 1 164 ILE 6 21 68 12 17.6 -0.8 . 1 165 GLY 3 16 28 11 39.3 0.7 . 1 166 GLU 5 13 22 9 40.9 0.8 . 1 167 GLU 5 9 18 7 38.9 0.7 . 1 168 THR 4 23 40 16 40.0 0.7 . 1 169 LYS 7 16 38 7 18.4 -0.7 . 1 170 ILE 6 28 68 19 27.9 -0.1 . 1 171 GLU 5 21 27 14 51.9 1.6 >sigma 1 172 ILE 6 18 58 13 22.4 -0.5 . 1 173 ARG 7 18 44 9 20.5 -0.6 . 1 174 GLU 5 7 8 5 62.5 2.3 >sigma 1 175 GLU 5 8 20 7 35.0 0.4 . 1 176 PRO 5 13 25 8 32.0 0.2 . 1 177 ALA 3 14 28 9 32.1 0.2 . 1 178 SER 4 9 14 5 35.7 0.4 . 1 179 GLU 5 5 8 3 37.5 0.6 . 1 180 VAL 5 9 30 6 20.0 -0.6 . 1 181 LEU 7 2 12 1 8.3 -1.4 >sigma 1 182 GLU 5 2 10 0 0.0 -2.0 >sigma 1 183 GLU 5 1 10 1 10.0 -1.3 >sigma 1 184 GLY 3 1 6 1 16.7 -0.9 . 1 185 GLY 3 0 3 0 0.0 -2.0 >sigma stop_ save_
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