NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type
32572 1gcc cing 2-parsed STAR comment


data_1gcc_MR_file_constraints


save_Conversion_project
    _Study_list.Sf_category  study_list 
    _Study_list.Entry_ID     parsed_1gcc 
    _Study_list.ID           1 

    loop_
        _Study.ID 
        _Study.Name 
        _Study.Type 
        _Study.Details 
        _Study.Entry_ID 
        _Study.Study_list_ID 

        1   "Conversion project"    NMR   .   parsed_1gcc   1   
    stop_

save_


save_entry_information
    _Entry.Sf_category                  entry_information 
    _Entry.ID                           parsed_1gcc 
    _Entry.Title                       "Original constraint list(s)" 
    _Entry.Version_type                 original 
    _Entry.Submission_date              . 
    _Entry.Accession_date               . 
    _Entry.Last_release_date            . 
    _Entry.Original_release_date        . 
    _Entry.Origination                  . 
    _Entry.NMR_STAR_version             3.1 
    _Entry.Original_NMR_STAR_version    . 
    _Entry.Experimental_method          NMR 
    _Entry.Experimental_method_subtype  . 

    loop_
        _Related_entries.Database_name 
        _Related_entries.Database_accession_code 
        _Related_entries.Relationship 
        _Related_entries.Entry_ID 

        PDB   1gcc   "Master copy"    parsed_1gcc   
    stop_

save_


save_global_Org_file_characteristics
    _Constraint_stat_list.Sf_category  constraint_statistics 
    _Constraint_stat_list.Entry_ID     parsed_1gcc 
    _Constraint_stat_list.ID           1 

    loop_
        _Constraint_file.ID 
        _Constraint_file.Constraint_filename 
        _Constraint_file.Software_ID 
        _Constraint_file.Software_label 
        _Constraint_file.Software_name 
        _Constraint_file.Block_ID 
        _Constraint_file.Constraint_type 
        _Constraint_file.Constraint_subtype 
        _Constraint_file.Constraint_subsubtype 
        _Constraint_file.Constraint_number 
        _Constraint_file.Entry_ID 
        _Constraint_file.Constraint_stat_list_ID 

        1   1gcc.mr   .   .   "MR format"     1    comment                  "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .    n/a            2    comment                  "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .    XPLOR/CNS      3    distance                  NOE                 simple             0   parsed_1gcc   1   
        1   1gcc.mr   .   .    n/a            4    comment                  "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .    XPLOR/CNS      5    distance                  NOE                 simple             0   parsed_1gcc   1   
        1   1gcc.mr   .   .    n/a            6    comment                  "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .    XPLOR/CNS      7    distance                  NOE                 simple             0   parsed_1gcc   1   
        1   1gcc.mr   .   .    n/a            8    comment                  "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .    XPLOR/CNS      9    distance                 "hydrogen bond"      simple             0   parsed_1gcc   1   
        1   1gcc.mr   .   .    n/a           10    comment                  "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .    XPLOR/CNS     11    distance                 "hydrogen bond"      simple             0   parsed_1gcc   1   
        1   1gcc.mr   .   .    n/a           12    comment                  "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .    XPLOR/CNS     13   "dihedral angle"          "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .    n/a           14    comment                  "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .    XPLOR/CNS     15   "dihedral angle"          "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
        1   1gcc.mr   .   .   "MR format"    16   "nomenclature mapping"    "Not applicable"    "Not applicable"    0   parsed_1gcc   1   
    stop_

save_


save_MR_file_comment_2
    _Org_constr_file_comment.Sf_category         org_constr_file_comment 
    _Org_constr_file_comment.Entry_ID            parsed_1gcc 
    _Org_constr_file_comment.ID                  1 
    _Org_constr_file_comment.Constraint_file_ID  1 
    _Org_constr_file_comment.Block_ID            2 
    _Org_constr_file_comment.Details            "Generated by Wattos" 
    _Org_constr_file_comment.Comment            
;
This file consists of A. NOE interproton distance restraints within protein,
B. those within DNA, C. intermolecular NOE restraints, D. hydrogen bond 
restraints in protein, and E. theoretical restraints for DNA (see Omichinski 
et al. Science 261, 438-446, 1993; Werner et al. Cell 81, 705-714, 1995 for 
the DNA theoretical restraints).
All were used for the simulated anealing by XPLOR 3.1 but only A, B, and C 
were used in the restraind molecular dynamical calculation by AMBER 4.1.
NOE restraints from bases 1, 2, 25, and 26, either, were not used in the 
restrained molecular dynamics.
 
A. NOE interproton distance restraints within protein
;

save_





Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, April 18, 2024 5:49:15 PM GMT (wattos1)