NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage position program type
20285 2ff0 cing 1-original 4 XPLOR/CNS planarity


! file: plane.dat
! Planar restraints to maintain base pair planarity
! PBM from A. Szewczak
! LAST UPDATE: 11/4/02 JWP
! Adapted for SBS duplex: 7/26/05 IR

! NOTE: $PSCALE MUST BE DEFINED WITHIN THIS FILE OR IN EACH PROTOCOL!
! OTHERWISE THE DEFAULT IS: 300kcal/mol/A^2

evaluate ($pscale = 10)  {was 50}

! G1-C30 WC
!--------------------------------------------------------------------
group
selection=     ((resid  1 and name N1 and segid SBS) or (resid  1 and name N3 and segid SBS) or
  (resid  1 and name C5 and segid SBS) or (resid 30 and name N1 and segid SBS) or
   (resid 30 and name N3 and segid SBS) or (resid 30 and name C5 and segid SBS))
weight = $pscale end

! G2-C29 WC
!--------------------------------------------------------------------
group
selection=     ((resid   2 and name N1 and segid SBS) or (resid  2 and name N3 and segid SBS) or
  (resid   2 and name C5 and segid SBS) or (resid 29 and name N1 and segid SBS) or
   (resid  29 and name N3 and segid SBS) or (resid 29 and name C5 and segid SBS))
weight = $pscale end

! C3-G28 WC
!--------------------------------------------------------------------
group
selection=     ((resid  3 and name N1 and segid SBS) or (resid  3 and name N3 and segid SBS) or
  (resid  3 and name C5 and segid SBS) or (resid 28 and name N1 and segid SBS) or
   (resid 28 and name N3 and segid SBS) or (resid 28 and name C5 and segid SBS))
weight = $pscale end

! T4-A27 WC
!--------------------------------------------------------------------
group
selection=     ((resid  4 and name N1 and segid SBS) or (resid  4 and name N3 and segid SBS) or
  (resid  4 and name C5 and segid SBS) or (resid 27 and name N1 and segid SBS) or
   (resid 27 and name N3 and segid SBS) or (resid 27 and name C5 and segid SBS))
weight = $pscale end

! C5-G26 WC
!--------------------------------------------------------------------
group
selection=     ((resid  5 and name N1 and segid SBS) or (resid  5 and name N3 and segid SBS) or
  (resid  5 and name C5 and segid SBS) or (resid 26 and name N1 and segid SBS) or
   (resid 26 and name N3 and segid SBS) or (resid 26 and name C5 and segid SBS))
weight = $pscale end

! A6-T25 WC
!--------------------------------------------------------------------
group
selection=     ((resid  6 and name N1 and segid SBS) or (resid  6 and name N3 and segid SBS) or
  (resid  6 and name C5 and segid SBS) or (resid 25 and name N1 and segid SBS) or
   (resid 25 and name N3 and segid SBS) or (resid 25 and name C5 and segid SBS))
weight = $pscale end

! G7-C24 WC
!--------------------------------------------------------------------
group
selection=     ((resid  7 and name N1 and segid SBS) or (resid  7 and name N3 and segid SBS) or
  (resid  7 and name C5 and segid SBS) or (resid 24 and name N1 and segid SBS) or
   (resid 24 and name N3 and segid SBS) or (resid 24 and name C5 and segid SBS))
weight = $pscale end

! G8-C23 WC
!--------------------------------------------------------------------
group
selection=     ((resid  8 and name N1 and segid SBS) or (resid  8 and name N3 and segid SBS) or
  (resid  8 and name C5 and segid SBS) or (resid 23 and name N1 and segid SBS) or
   (resid 23 and name N3 and segid SBS) or (resid 23 and name C5 and segid SBS))
weight = $pscale end

! G9-C22 WC
!--------------------------------------------------------------------
group
selection=     ((resid  9 and name N1 and segid SBS) or (resid  9 and name N3 and segid SBS) or
  (resid  9 and name C5 and segid SBS) or (resid 22 and name N1 and segid SBS) or
   (resid 22 and name N3 and segid SBS) or (resid 22 and name C5 and segid SBS))
weight = $pscale end

! C10-G21 WC
!--------------------------------------------------------------------
group
selection=     ((resid 10 and name N1 and segid SBS) or (resid 10 and name N3 and segid SBS) or
  (resid 10 and name C5 and segid SBS) or (resid 21 and name N1 and segid SBS) or
   (resid 21 and name N3 and segid SBS) or (resid 21 and name C5 and segid SBS))
weight = $pscale end

! C11-G20 WC
!--------------------------------------------------------------------
group
selection=     ((resid 11 and name N1 and segid SBS) or (resid 11 and name N3 and segid SBS) or
  (resid 11 and name C5 and segid SBS) or (resid 20 and name N1 and segid SBS) or
   (resid 20 and name N3 and segid SBS) or (resid 20 and name C5 and segid SBS))
weight = $pscale end

! A12-T19 WC
!--------------------------------------------------------------------
group
selection=     ((resid 12 and name N1 and segid SBS) or (resid 12 and name N3 and segid SBS) or
  (resid 12 and name C5 and segid SBS) or (resid 19 and name N1 and segid SBS) or
   (resid 19 and name N3 and segid SBS) or (resid 19 and name C5 and segid SBS))
weight = $pscale end

! C13-G18 WC
!--------------------------------------------------------------------
group
selection=     ((resid 13 and name N1 and segid SBS) or (resid 13 and name N3 and segid SBS) or
  (resid 13 and name C5 and segid SBS) or (resid 18 and name N1 and segid SBS) or
   (resid 18 and name N3 and segid SBS) or (resid 18 and name C5 and segid SBS))
weight = $pscale end

! A14-T17 WC
!--------------------------------------------------------------------
group
selection=     ((resid 14 and name N1 and segid SBS) or (resid 14 and name N3 and segid SBS) or
  (resid 14 and name C5 and segid SBS) or (resid 17 and name N1 and segid SBS) or
   (resid 17 and name N3 and segid SBS) or (resid 17 and name C5 and segid SBS))
weight = $pscale end

! G15-C16 WC
!--------------------------------------------------------------------
group
selection=     ((resid 15 and name N1 and segid SBS) or (resid 15 and name N3 and segid SBS) or
  (resid 15 and name C5 and segid SBS) or (resid 16 and name N1 and segid SBS) or
   (resid 16 and name N3 and segid SBS) or (resid 16 and name C5 and segid SBS))
weight = $pscale end



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