NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage position program type
16514 2a9x cing 1-original 4 XPLOR/CNS planarity


  
!biv2cmplx.plan.tbl
!restraints plane   !uncomment this line for use in "rna_refi," i.e. Clore type input file.
! file: plane.dat 
! Planar restraints to maintain base pair planarity 
! PBM from A. Szewczak 
! LAST UPDATE: 6/7/93 
!updated for u2a 12/2/96 
!
! NOTE: $PSCALE MUST BE DEFINED WITHIN THIS FILE OR IN EACH PROTOCOL! 
! OTHERWISE THE DEFAULT IS: 300kcal/mol/A^2 
evaluate ($pscale = 150)  {was 150}
! G4-C31 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 4 and name N1 and segid 2) or (resid 4 and name N3 and segid 2) or 
   (resid 4 and name C5 and segid 2) or (resid 31 and name N1 and segid 2) or
    (resid 31 and name N3 and segid 2) or (resid 31 and name C5 and segid 2))
 weight = $pscale end 
! 
! G5-C30 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 5 and name N1 and segid 2) or (resid 5 and name N3 and segid 2) or
   (resid 5 and name C5 and segid 2) or (resid 30 and name N1 and segid 2) or
    (resid 30 and name N3 and segid 2) or (resid 30 and name C5 and segid 2))
 weight = $pscale end 
! 
! C6-C29 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 6 and name N1 and segid 2) or (resid 6 and name N3 and segid 2) or
   (resid 6 and name C5 and segid 2) or (resid 29 and name N1 and segid 2) or
    (resid 29 and name N3 and segid 2) or (resid 29 and name C5 and segid 2))
 weight = $pscale end 
! 
! U7-A28 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 7 and name N1 and segid 2) or (resid 7 and name N3 and segid 2) or
   (resid 7 and name C5 and segid 2) or (resid 28 and name N1 and segid 2) or
    (resid 28 and name N3 and segid 2) or (resid 28 and name C5 and segid 2))
 weight = $pscale end
!
! C8-G27 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 8 and name N1 and segid 2) or (resid 8 and name N3 and segid 2) or
   (resid 8 and name C5 and segid 2) or (resid 27 and name N1 and segid 2) or
    (resid 27 and name N3 and segid 2) or (resid 27 and name C5 and segid 2))
 weight = $pscale end
!
! G9-C26 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 9 and name N1 and segid 2) or (resid 9 and name N3 and segid 2) or
   (resid 9 and name C5 and segid 2) or (resid 26 and name N1 and segid 2) or
    (resid 26 and name N3 and segid 2) or (resid 26 and name C5 and segid 2))
 weight = $pscale end
!
! G11-C25 Bulge-pair-WC?
!--------------------------------------------------------------------
 group
 selection=     ((resid 11 and name N1 and segid 2) or (resid 11 and name N3 and segid 2) or
   (resid 11 and name C5 and segid 2) or (resid 25 and name N1 and segid 2) or
    (resid 25 and name N3 and segid 2) or (resid 25 and name C5 and segid 2))
 weight = $pscale end
!
! A13-U24 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 13 and name N1 and segid 2) or (resid 13 and name N3 and segid 2) or
   (resid 13 and name C5 and segid 2) or (resid 24 and name N1 and segid 2) or
    (resid 24 and name N3 and segid 2) or (resid 24 and name C5 and segid 2))
 weight = $pscale end
!
! G14-C23 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 14 and name N1 and segid 2) or (resid 14 and name N3 and segid 2) or
   (resid 14 and name C5 and segid 2) or (resid 23 and name N1 and segid 2) or
    (resid 23 and name N3 and segid 2) or (resid 23 and name C5 and segid 2))
 weight = $pscale end
!
! C15-G22 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 15 and name N1 and segid 2) or (resid 15 and name N3 and segid 2) or
   (resid 15 and name C5 and segid 2) or (resid 22 and name N1 and segid 2) or
    (resid 22 and name N3 and segid 2) or (resid 22 and name C5 and segid 2))
 weight = $pscale end
!
! U16-A21 WC
!--------------------------------------------------------------------
 group
 selection=     ((resid 16 and name N1 and segid 2) or (resid 16 and name N3 and segid 2) or
   (resid 16 and name C5 and segid 2) or (resid 21 and name N1 and segid 2) or
    (resid 21 and name N3 and segid 2) or (resid 21 and name C5 and segid 2))
 weight = $pscale end
!
! A13-U10 triple
!--------------------------------------------------------------------
 group
 selection=     ((resid 13 and name N7 and segid 2) or (resid 13 and name C8 and segid 2) or
   (resid 13 and name C5 and segid 2) or (resid 10 and name N1 and segid 2) or
    (resid 10 and name N3 and segid 2) or (resid 10 and name C5 and segid 2))
 weight = 15 end
end


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